RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MGAT5Q09328 741 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 PRKG2Q13237 762 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 XRCC4Q13426 336 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 GTF2H3Q13889 308 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 SLC1A5Q15758 541 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 STX1AQ16623 288 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 TAZQ16635 292 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HADHQ16836 314 aaKnown RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 C21orf62-AS1Q17RA5 79 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 BCL7AQ4VC05 210 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 LDLRAP1Q5SW96 308 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 RHBDD2Q6NTF9 364 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ALKBH5Q6P6C2 394 aaKnown RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CYB5D1Q6P9G0 228 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 KLHL35Q6PF15 583 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 MFSD7Q6UXD7 560 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 FJX1Q86VR8 437 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 RAB43Q86YS6 212 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CFAP206Q8IYR0 622 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF567Q8N184 647 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CPEB3Q8NE35 698 aaKnown RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 PIK3C3Q8NEB9 887 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CATSPER1Q8NEC5 780 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 OR10H5Q8NGA6 315 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 OR52E1Q8NGJ3 308 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 OR13C4Q8NGS5 318 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 OR2Y1Q8NGV0 311 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF398Q8TD17 642 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 BLOC1S5Q8TDH9 187 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 FAR1Q8WVX9 515 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ZFPM2Q8WW38 1151 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ITLN2Q8WWU7 325 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 TFAP2CQ92754 450 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 OR2A14Q96R47 310 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ILKAPQ9H0C8 392 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 FAM96AQ9H5X1 160 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 C10orf88Q9H8K7 445 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ANO10Q9NW15 660 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 SMOXQ9NWM0 555 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CHMP5Q9NZZ3 219 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 FBXL4Q9UKA2 621 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ACSL5Q9ULC5 683 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ICKQ9UPZ9 632 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HYOU1Q9Y4L1 999 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 NOX1Q9Y5S8 564 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HS3ST3B1Q9Y662 390 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 ARHGAP21Q5T5U3 1957 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CUBNO60494 3623 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 IGLV3-16A0A075B6K0 115 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 LRRD1A4D1F6 860 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF487B1APH4 448 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 C9J4A7 227 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 E7EQ34 232 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 AGPSO00116 658 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ONECUT2O95948 504 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 EPOP01588 193 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 SERPING1P05155 500 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 LTA4HP09960 611 aaKnown RBP4.37□□□□□ -1.71
CKS1B-207ENST00000477676 SLC35G4P0C7Q5 338 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 UGT2B7P16662 529 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 MSH3P20585 1137 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 MCM3P25205 808 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 MST1P26927 711 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ACADLP28330 430 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 AKT1P31749 480 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ADRA1AP35348 466 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 TSFMP43897 325 aaKnown RBP4.37□□□□□ -1.71
CKS1B-207ENST00000477676 PRLHRP49683 370 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 EFNA3P52797 238 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 DYNLT1P63172 113 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 MPP3Q13368 585 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 BOP1Q14137 746 aaKnown RBP4.37□□□□□ -1.71
CKS1B-207ENST00000477676 IQCB1Q15051 598 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 PDK1Q15118 436 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 BEAN1Q3B7T3 259 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 NKAIN1Q4KMZ8 207 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 TMTC4Q5T4D3 741 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 LYPLAL1Q5VWZ2 237 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 FBXO42Q6P3S6 717 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 SPESP1Q6UW49 350 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 SHISA6Q6ZSJ9 500 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 FRMD7Q6ZUT3 714 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 PIANPQ8IYJ0 282 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ZADH2Q8N4Q0 377 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 DNAJC22Q8N4W6 341 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ACVR1CQ8NER5 493 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 ANKRD20A12PQ8NF67 263 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 IPMKQ8NFU5 416 aa4.37□□□□□ -1.71
CKS1B-207ENST00000477676 OR4K2Q8NGD2 314 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms