RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CPNE3O75131 537 aaKnown RBP14.59□□□□□ -0.07
SEC13-215ENST00000477547 KIAA0754O94854 1291 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SNUPNO95149 360 aaKnown RBP14.59□□□□□ -0.07
SEC13-215ENST00000477547 SERPINA6P08185 405 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 UROSP10746 265 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 PIK3CBP42338 1070 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 RTP5Q14D33 572 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 KANK2Q63ZY3 851 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 IGF2-ASQ6U949 168 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 ATG14Q6ZNE5 492 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 RNF175Q8N4F7 328 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 CREB3L4Q8TEY5 395 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SELENOMQ8WWX9 145 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SLC39A7Q92504 469 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 TM4SF19Q96DZ7 209 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SORT1Q99523 831 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 MS4A8Q9BY19 250 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SLC6A16Q9GZN6 736 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 ZNF395Q9H8N7 513 aaPredicted RBP14.59□□□□□ -0.07
SEC13-215ENST00000477547 ASCL3Q9NQ33 180 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 ENAMQ9NRM1 1142 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 FARSBQ9NSD9 589 aaKnown RBP14.59□□□□□ -0.07
SEC13-215ENST00000477547 CUTCQ9NTM9 273 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 TXLNGQ9NUQ3 528 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 RAP2CQ9Y3L5 183 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 SEC16AO15027 2179 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 HYKKA2RU49 373 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 MAGEB17A8MXT2 336 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 KLF11O14901 512 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 SNNO75324 88 aaPredicted RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 SH3BGRLO75368 114 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 DXOO77932 396 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 STK17BO94768 372 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 CHEK2O96017 543 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 PDYNP01213 254 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 ZNF28P17035 718 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 HNRNPH1P31943 449 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 NEK2P51955 445 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 STXBP1P61764 594 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 NDUFA9Q16795 377 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 MUM1Q2TAK8 710 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 YOD1Q5VVQ6 348 aaPredicted RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 GARNL3Q5VVW2 1013 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 TMEM214Q6NUQ4 689 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 CKAP2Q8WWK9 683 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 ZNF75CPQ92670 426 aaPredicted RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 GAL3ST3Q96A11 431 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 CLIP3Q96DZ5 547 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 MAGEB18Q96M61 343 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 DCBLD2Q96PD2 775 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 C20orf27Q9GZN8 174 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 THSD1Q9NS62 852 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 THAP1Q9NVV9 213 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 DHCR7Q9UBM7 475 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 DKK4Q9UBT3 224 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 NDOR1Q9UHB4 597 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 MRPS2Q9Y399 296 aaKnown RBP14.58□□□□□ -0.08
SEC13-215ENST00000477547 PCDHGA7Q9Y5G6 932 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 MAST4O15021 2626 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 SCN2AQ99250 2005 aa14.58□□□□□ -0.08
SEC13-215ENST00000477547 AHCTF1Q8WYP5 2266 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 CCDC88CQ9P219 2028 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 A0A087WV48 116 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 A0A1B0GX78 115 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 URADA6NGE7 173 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 CDRT15L2A8MXV6 281 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 C4orf51C9J302 202 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 DSCR3O14972 297 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 NVLO15381 856 aaKnown RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 ERI3O43414 337 aaKnown RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 SKAP2O75563 359 aaPredicted RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 MED26O95402 600 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 NTRK1P04629 796 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 HBQ1P09105 142 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 ZNF888P0CJ79 500 aaPredicted RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 PLA2G2AP14555 144 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 IL1RNP18510 177 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 SLC5A2P31639 672 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 GCGRP47871 477 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 ARSFP54793 590 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 EMP3P54852 163 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 OCRLQ01968 901 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 HYAL2Q12891 473 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 CSTF3Q12996 717 aaKnown RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 RHBDD2Q6NTF9 364 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 TTLL10Q6ZVT0 673 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 ABHD13Q7L211 337 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 KIRREL3Q8IZU9 778 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 ARHGEF39Q8N4T4 335 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 AFAP1L2Q8N4X5 818 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 METTL27Q8N6F8 245 aaPredicted RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 MTFMTQ96DP5 389 aaKnown RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 CMTM7Q96FZ5 175 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms