RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 LRRK2Q5S007 2527 aa13.33□□□□□ -0.28
SRRT-210ENST00000477529 USP9XQ93008 2570 aaPredicted RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 A0A1W2PQ72 361 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 ESPNB1AK53 854 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 B8ZZF3 427 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 K7EPI3 171 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 PEX12O00623 359 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 JRKO75564 520 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 WFS1O76024 890 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 BMP10O95393 424 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 B3GALT4O96024 378 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 SERPINA6P08185 405 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 GFAPP14136 432 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 ALOX12P18054 663 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 CXCR2P25025 360 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 GSTM2P28161 218 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 XCR1P46094 333 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 CCL11P51671 97 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 ALDH18A1P54886 795 aaKnown RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 DOC2AQ14183 400 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 RBBP5Q15291 538 aaKnown RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 TSNAXIP1Q2TAA8 658 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 DEFB134Q4QY38 66 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 XKR6Q5GH73 641 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 VN1R5Q7Z5H4 357 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 KRT78Q8N1N4 520 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 TRPV3Q8NET8 790 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 FDCSPQ8NFU4 85 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 OR11G2Q8NGC1 345 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 OR5T3Q8NGG3 340 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 UTP15Q8TED0 518 aaKnown RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 MZB1Q8WU39 189 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 NUDT9Q9BW91 350 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 YIPF2Q9BWQ6 316 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 KLHL31Q9H511 634 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 NT5DC2Q9H857 520 aa13.32□□□□□ -0.28
SRRT-210ENST00000477529 PSMC3IPQ9P2W1 217 aaPredicted RBP13.32□□□□□ -0.28
SRRT-210ENST00000477529 SPTAN1Q13813 2472 aaKnown RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 POLEQ07864 2286 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 PCNX3Q9H6A9 2034 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 SHBGP04278 402 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 COX6A1P12074 109 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 COL6A2P12110 1019 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 PGDP52209 483 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 VSNL1P62760 191 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 OLR1P78380 273 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 IRF8Q02556 426 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 CHIT1Q13231 466 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 TBCCQ15814 346 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 TOR1AIP1Q5JTV8 583 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 TIFABQ6ZNK6 161 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 PTRH1Q86Y79 214 aaKnown RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 CLEC1AQ8NC01 280 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 TTLQ8NG68 377 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 UBLCP1Q8WVY7 318 aaPredicted RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRRT-210ENST00000477529 GAL3ST3Q96A11 431 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 MTBPQ96DY7 904 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 SEC16BQ96JE7 1060 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 EFCAB11Q9BUY7 163 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 RBCK1Q9BYM8 510 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 GPR83Q9NYM4 423 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
SRRT-210ENST00000477529 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
SRRT-210ENST00000477529 CACNA1CQ13936 2221 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 LRIT2A6NDA9 550 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 A6NL46 340 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 E2F3O00716 465 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 DNAJB6O75190 326 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 CLEC3AO75596 197 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
SRRT-210ENST00000477529 SBK3P0C264 359 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 ACPPP15309 386 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 EPB42P16452 691 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 HNF4AP41235 474 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 CASP2P42575 452 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 EMP2P54851 167 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 SOX8P57073 446 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 RAB8AP61006 207 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 SKP1P63208 163 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 PCDH1Q08174 1060 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 AIMP2Q13155 320 aaKnown RBP13.3□□□□□ -0.28
SRRT-210ENST00000477529 RAPSNQ13702 412 aa13.3□□□□□ -0.28
SRRT-210ENST00000477529 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRRT-210ENST00000477529 ADPRMQ3LIE5 342 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms