RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PPA1Q15181 289 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 RAB12Q6IQ22 244 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 TMEM126BQ8IUX1 230 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 TMEM99Q8N816 258 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 GPRC5AQ8NFJ5 357 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 PSMA8Q8TAA3 256 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 ZNRF4Q8WWF5 429 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 GGHQ92820 318 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 TMEM237Q96Q45 408 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 PITPNM3Q9BZ71 974 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 RPF1Q9H9Y2 349 aaKnown RBP5.2□□□□□ -1.58
VPS50-212ENST00000476413 EXOC1Q9NV70 894 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 FETUBQ9UGM5 382 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 PSORS1C1Q9UIG5 152 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 COLEC10Q9Y6Z7 277 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 A0A1W2PR80 420 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 GLTPD2A6NH11 291 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 A8MVM7 634 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 PRSS44E7EML9 344 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 CYTIPO60759 359 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 CXCL14O95715 111 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 NUDT17P0C025 328 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 RPL35AP18077 110 aaKnown RBP5.19□□□□□ -1.58
VPS50-212ENST00000476413 GJB2P29033 226 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SOX3P41225 446 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SLC12A3P55017 1021 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 KCNJ10P78508 379 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SLC3A1Q07837 685 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 DUSP5Q16690 384 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 ZNF619Q8N2I2 560 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 TEX26Q8N6G2 289 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 NIPA2Q8N8Q9 360 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SMAP2Q8WU79 429 aaPredicted RBP5.19□□□□□ -1.58
VPS50-212ENST00000476413 C2orf48Q96LS8 159 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 F2RL3Q96RI0 385 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 TDRD1Q9BXT4 1180 aaKnown RBP5.19□□□□□ -1.58
VPS50-212ENST00000476413 NACAP1Q9BZK3 213 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 DPEP2Q9H4A9 486 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 TMOD3Q9NYL9 352 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 HACD3Q9P035 362 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 TMEM181Q9P2C4 612 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SATB2Q9UPW6 733 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 TCF19Q9Y242 345 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 NCKAP1Q9Y2A7 1128 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 PYGO1Q9Y3Y4 419 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 SPAG9O60271 1321 aaKnown RBP5.19□□□□□ -1.58
VPS50-212ENST00000476413 NEDD4P46934 1319 aa5.19□□□□□ -1.58
VPS50-212ENST00000476413 A0A087WW49 117 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 A0A087WYN8 130 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 A0A087WZ39 114 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 M0R296 226 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 RTCAO00442 366 aaKnown RBP5.18□□□□□ -1.58
VPS50-212ENST00000476413 ZNF195O14628 629 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 STBD1O95210 358 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 ABHD2P08910 425 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 CEBPBP17676 345 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 CHRNB4P30926 498 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 OR1D2P34982 312 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 SGCGQ13326 291 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 MSLNQ13421 630 aaPredicted RBP5.18□□□□□ -1.58
VPS50-212ENST00000476413 GPR50Q13585 617 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 CDH18Q13634 790 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 GRB14Q14449 540 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 C1orf186Q6ZWK4 172 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 TRMT11Q7Z4G4 463 aaKnown RBP5.18□□□□□ -1.58
VPS50-212ENST00000476413 CNBD1Q8NA66 436 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 NKX3-1Q99801 234 aaPredicted RBP5.18□□□□□ -1.58
VPS50-212ENST00000476413 WWTR1Q9GZV5 400 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 NAPBQ9H115 298 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 HMG20BQ9P0W2 317 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 TRMT6Q9UJA5 497 aaKnown RBP5.18□□□□□ -1.58
VPS50-212ENST00000476413 EXOC6BQ9Y2D4 811 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 ANGPTL3Q9Y5C1 460 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 NPHP3Q7Z494 1330 aa5.18□□□□□ -1.58
VPS50-212ENST00000476413 A0A087X002 238 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 CCDC162PA2VCL2 907 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 TYMPP19971 482 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 NR0B1P51843 470 aaKnown RBP5.17□□□□□ -1.58
VPS50-212ENST00000476413 XGP55808 180 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 GUCY2DQ02846 1103 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 ITGA9Q13797 1035 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 GK2Q14410 553 aaPredicted RBP5.17□□□□□ -1.58
VPS50-212ENST00000476413 EFTUD2Q15029 972 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS50-212ENST00000476413 MAPK11Q15759 364 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 C17orf107Q6ZR85 190 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 C15orf52Q6ZUT6 534 aaKnown RBP5.17□□□□□ -1.58
VPS50-212ENST00000476413 PTAR1Q7Z6K3 402 aaPredicted RBP5.17□□□□□ -1.58
VPS50-212ENST00000476413 CUZD1Q86UP6 607 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 KLHDC8BQ8IXV7 354 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 TCEANCQ8N8B7 351 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 FAM76AQ8TAV0 307 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 SEPT8Q92599 483 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 CASP10Q92851 521 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 CCDC47Q96A33 483 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms