RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CLEC20AQ6ZU45 233 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ZNF551Q7Z340 670 aaPredicted RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ZZZ3Q8IYH5 903 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 KCT2Q8NC54 265 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 OR6M1Q8NGM8 313 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 CHTF18Q8WVB6 975 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 RBPMSQ93062 196 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 MSLNLQ96KJ4 702 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 PPP3R2Q96LZ3 170 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 LINC00052Q96N35 136 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 OR52E6Q96RD3 313 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 NPAS1Q99742 590 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 HHATLQ9HCP6 504 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 SNTG1Q9NSN8 517 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 CATSPERZQ9NTU4 200 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 RBFOX1Q9NWB1 397 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 RDH8Q9NYR8 311 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 DTX4Q9Y2E6 619 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 CFAP20Q9Y6A4 193 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 RPS10-NUDT3A0A1W2PQS6 291 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ZNF670-ZNF695F2Z2N8 137 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 SLC10A3P09131 477 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 SLC2A4P14672 509 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 TSPAN7P41732 249 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 TGM4P49221 684 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 HK3P52790 923 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 RPL38P63173 70 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ABRAXAS2Q15018 415 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 TAF1CQ15572 869 aaPredicted RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 LCN1P1Q5VSP4 162 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 FCRLBQ6BAA4 426 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 MRNIPQ6NTE8 343 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 VTCN1Q7Z7D3 282 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ADGRG3Q86Y34 549 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 B3GNT7Q8NFL0 401 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 NANPQ8TBE9 248 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 UTP15Q8TED0 518 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 IMP4Q96G21 291 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 QRFPRQ96P65 431 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 EPYCQ99645 322 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 GPR20Q99678 358 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 MARVELD1Q9BSK0 173 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 DPY30Q9C005 99 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 TTYH1Q9H313 450 aaPredicted RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 HEXA-AS1Q9H8Q6 139 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 EXOSC4Q9NPD3 245 aaKnown RBP10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ZDHHC4Q9NPG8 344 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 SERHLQ9NQF3 203 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 PCDHGA2Q9Y5H1 932 aa10.19□□□□□ -0.78
ABCF1-205ENST00000475993 ZSWIM8A7E2V4 1837 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 FZD9O00144 591 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 SCAMP3O14828 347 aaKnown RBP10.18□□□□□ -0.78
ABCF1-205ENST00000475993 TSPAN12O95859 305 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 LGI1O95970 557 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 SCG5P05408 212 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 JUPP14923 745 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ARSBP15848 533 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ITGB7P26010 798 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 PTPN6P29350 595 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 NUBP1P53384 320 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 DSG2Q14126 1118 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 LY6KQ17RY6 165 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 TTLL9Q3SXZ7 439 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ZNF425Q6IV72 752 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 BEND4Q6ZU67 534 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 DDX53Q86TM3 631 aaKnown RBP10.18□□□□□ -0.78
ABCF1-205ENST00000475993 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 TIGD4Q8IY51 512 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 KRTCAP2Q8N6L1 136 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 UPRTQ96BW1 309 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 CINPQ9BW66 212 aaPredicted RBP10.18□□□□□ -0.78
ABCF1-205ENST00000475993 KCNH6Q9H252 994 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ESRP2Q9H6T0 727 aaKnown RBP10.18□□□□□ -0.78
ABCF1-205ENST00000475993 NYNRINQ9P2P1 1898 aaKnown RBP10.18□□□□□ -0.78
ABCF1-205ENST00000475993 TRAV19A0A0A6YYK7 116 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 FZD6O60353 706 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 SLC43A1O75387 559 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 RHOBTB1O94844 696 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 GNRH1P01148 92 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ESR1P03372 595 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 RAF1P04049 648 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 CYP17A1P05093 508 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 TPOP07202 933 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 PTPRAP18433 802 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 BMP8BP34820 402 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 CRYBB2P43320 205 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 LRRC74AQ0VAA2 488 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 GRK1Q15835 563 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 DUSP6Q16828 381 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 SLC39A12Q504Y0 691 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 CLLU1Q5K131 121 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 FBXO47Q5MNV8 452 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 GPR139Q6DWJ6 353 aa10.18□□□□□ -0.78
ABCF1-205ENST00000475993 ANKRD54Q6NXT1 300 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms