RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 AGTR2P50052 363 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 CDH13P55290 713 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 CDC16Q13042 620 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 GTF2H2Q13888 395 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 LACTB2Q53H82 288 aaPredicted RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 GTF2H2CQ6P1K8 395 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 FIGLAQ6QHK4 219 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 PTRH1Q86Y79 214 aaKnown RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 CLYBLQ8N0X4 340 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 C2orf73Q8N5S3 287 aaPredicted RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 GBP7Q8N8V2 638 aaPredicted RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 OR2A1Q8NGT9 310 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 RFWD2Q8NHY2 731 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 TRPC4APQ8TEL6 797 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 ZUFSPQ96AP4 578 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 THOC1Q96FV9 657 aaKnown RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 ZNF382Q96SR6 550 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 SEMA4BQ9NPR2 832 aaPredicted RBP14.91□□□□□ -0.02
CPSF3-203ENST00000475482 SPATA7Q9P0W8 599 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 SRPK3Q9UPE1 567 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 KLHL20Q9Y2M5 609 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 TRAF6Q9Y4K3 522 aa14.91□□□□□ -0.02
CPSF3-203ENST00000475482 KRT87PA6NCN2 255 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 MYO1CO00159 1063 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 WISP1O95388 367 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 ESRRBO95718 433 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 AGXTP21549 392 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 CCND1P24385 295 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 GRIA3P42263 894 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 CCNG1P51959 295 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 SF1Q15637 639 aaKnown RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 MRPL14Q6P1L8 145 aaKnown RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 GPRIN3Q6ZVF9 776 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 ACAD11Q709F0 780 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 GOLGA7Q7Z5G4 137 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 MCATQ8IVS2 390 aaKnown RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 TEX9Q8N6V9 391 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 ZNF655Q8N720 491 aaPredicted RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 OR9A1PQ8NGU1 263 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 N4BP2L2Q92802 583 aaPredicted RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 RILPQ96NA2 401 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 CCT7Q99832 543 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 C17orf62Q9BQA9 187 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 TMEM79Q9BSE2 394 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 MRGBPQ9NV56 204 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 INTS7Q9NVH2 962 aaKnown RBP14.9□□□□□ -0.02
CPSF3-203ENST00000475482 ZDHHC2Q9UIJ5 367 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 SNX7Q9UNH6 387 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 TP53TG5Q9Y2B4 290 aa14.9□□□□□ -0.02
CPSF3-203ENST00000475482 AZIN1O14977 448 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 TAPBPO15533 448 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 CCDC22O60826 627 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 CEACAM4O75871 244 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 DNAJB5O75953 348 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 PDGFAP04085 211 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 ENO1P06733 434 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 UROSP10746 265 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 CASRP41180 1078 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 DCDP81605 110 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 SF3A3Q12874 501 aaKnown RBP eCLIP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 ARHGAP19Q14CB8 494 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 ZC3H12BQ5HYM0 836 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 FAM69BQ5VUD6 431 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 AGTRAPQ6RW13 159 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 KLHDC8AQ8IYD2 350 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 OR2L3Q8NG85 312 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 AGR3Q8TD06 166 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 AGAP11Q8TF27 550 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 LRRC37BQ96QE4 947 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 PKP4Q99569 1192 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 SHCBP1LQ9BZQ2 653 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 SLC7A5P2Q9GIP4 190 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 ING2Q9H160 280 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 NOL11Q9H8H0 719 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 IPPKQ9H8X2 491 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 KCNK13Q9HB14 408 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 SLC22A11Q9NSA0 550 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 DNAJC11Q9NVH1 559 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 STOX2Q9P2F5 926 aaPredicted RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 DHCR7Q9UBM7 475 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 TRIM33Q9UPN9 1127 aa14.89□□□□□ -0.03
CPSF3-203ENST00000475482 PCDHGA9Q9Y5G4 932 aaKnown RBP14.89□□□□□ -0.03
CPSF3-203ENST00000475482 SPENQ96T58 3664 aaKnown RBP14.88□□□□□ -0.03
CPSF3-203ENST00000475482 FITM1A5D6W6 292 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 LRRC14BA6NHZ5 514 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 C9J4A7 227 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 PYCARD-AS1I3L0S3 204 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 DIAPH2O60879 1101 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CTSVO60911 334 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CNOT3O75175 753 aaKnown RBP14.88□□□□□ -0.03
CPSF3-203ENST00000475482 WDR47O94967 919 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CD63P08962 238 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 ITGAXP20702 1163 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 PSMB5P28074 263 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 SLC6A12P48065 614 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 TLE1Q04724 770 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 KLRB1Q12918 225 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 FASTKQ14296 549 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms