RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 KCTD13Q8WZ19 329 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 EZH1Q92800 747 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 ASB9Q96DX5 294 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SMOQ99835 787 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CD244Q9BZW8 370 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 KCNH6Q9H252 994 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MEAF6Q9HAF1 191 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MED11Q9P086 117 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ITGB1BP2Q9UKP3 347 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ZNF41P51814 821 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 TPTEP56180 551 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 THOC7Q6I9Y2 204 aaKnown RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 DNAJB8Q8NHS0 232 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 PEBP4Q96S96 227 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 AIFM2Q9BRQ8 373 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CYP8B1Q9UNU6 501 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 DLGAP4Q9Y2H0 992 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 MTMR11A4FU01 709 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MANBAO00462 879 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 HSPA12AO43301 675 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 JMJD7P0C870 316 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CBLBQ13191 982 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 PPP1R3AQ16821 1122 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SLC9B2Q86UD5 537 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 TMCO6Q96DC7 493 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ASPNQ9BXN1 380 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 HSD3B7Q9H2F3 369 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 HRASLS2Q9NWW9 162 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ZIM2Q9NZV7 527 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ZNF670-ZNF695F2Z2N8 137 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TBX10O75333 385 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 UQCRC1P31930 480 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 PRMT2P55345 433 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ZNF267Q14586 743 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 TGFBIQ15582 683 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 NNATQ16517 81 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 MAPK15Q8TD08 544 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ZNF384Q8TF68 577 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ARHGAP9Q9BRR9 750 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 BEX2Q9BXY8 128 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 BEX1Q9HBH7 125 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 MEMO1Q9Y316 297 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 SLC33A1O00400 549 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 RCBTB2O95199 551 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 GSK3BP49841 420 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 CLRN1P58418 232 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ST3GAL3Q11203 375 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 EPYCQ99645 322 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 THUMPD1Q9NXG2 353 aaKnown RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 GABRQQ9UN88 632 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TMEM44Q2T9K0 475 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ZBTB26Q9HCK0 441 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 GJB5O95377 273 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 RAB36O95755 333 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 PIM1P11309 404 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 INAVAQ3KP66 663 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 Q6ZVL8 140 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TMCO2Q7Z6W1 182 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 MOCOSQ96EN8 888 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 CMKLR1Q99788 373 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 GSKIPQ9P0R6 139 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 HCN2Q9UL51 889 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 PCDHB14Q9Y5E9 798 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 COCHO43405 550 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 LEFTY1O75610 366 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 LHCGRP22888 699 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 ETV3P41162 512 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 MAGEA12P43365 314 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 MECP2P51608 486 aaKnown RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 RABL3Q5HYI8 236 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 CARD17Q5XLA6 110 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 KLHDC10Q6PID8 442 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 GALNT10Q86SR1 603 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 PAQR7Q86WK9 346 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 PLD6Q8N2A8 252 aaKnown RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 OR2L2Q8NH16 312 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 WACQ9BTA9 647 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TSSK6Q9BXA6 273 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 FBXO9Q9UK97 447 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 ENTPD6O75354 484 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 SLC6A4P31645 630 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 OGFRL1Q5TC84 451 aaPredicted RBP10.61□□□□□ -0.71
VAPB-204ENST00000475243 TMEM225Q6GV28 225 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 DTX3Q8N9I9 347 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 C12orf42Q96LP6 360 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 MND1Q9BWT6 205 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 TPT1P8Q9HAU6 139 aa10.61□□□□□ -0.71
VAPB-204ENST00000475243 SLIT2O94813 1529 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PP55 124 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PPK0 400 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms