RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MRPS2Q9Y399 296 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 IGLV3-12A0A075B6K2 115 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 RIPK2O43353 540 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SERPINA7P05543 415 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SERPIND1P05546 499 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SLC35E2BP0CK96 405 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 COX6A1P12074 109 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 HNMTP50135 292 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SKP1P63208 163 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 MAT1AQ00266 395 aaKnown RBP14.32□□□□□ -0.12
VARS-223ENST00000474643 CDKL1Q00532 357 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 RELAQ04206 551 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 FAM53BQ14153 422 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 PPP1R3AQ16821 1122 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 LGSNQ5TDP6 509 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 ABHD17BQ5VST6 288 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 KLC3Q6P597 504 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 CCDC91Q7Z6B0 441 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 LAPTM4BQ86VI4 370 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 BCORP1Q8N888 145 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 ST6GALNAC3Q8NDV1 305 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 OR56A3Q8NH54 315 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 UBLCP1Q8WVY7 318 aaPredicted RBP14.32□□□□□ -0.12
VARS-223ENST00000474643 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 CCDC77Q9BR77 488 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 TGIF2Q9GZN2 237 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 ALG9Q9H6U8 611 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 OLAHQ9NV23 265 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 HCN3Q9P1Z3 774 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 SHANK1Q9Y566 2161 aa14.32□□□□□ -0.12
VARS-223ENST00000474643 A0A096LPK6 155 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 IGHV1-45A0A0A0MS14 117 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 TRAV17A0A0B4J275 112 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 FEZF1A0PJY2 475 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 SUPT3HB4E1H0 165 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 H0YIG0 161 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 P2RX6O15547 441 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 SUPT3HO75486 399 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 WDR47O94967 919 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 BMP10O95393 424 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 C2P06681 752 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 CDH1P12830 882 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 IL1RNP18510 177 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 TFEBP19484 476 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 CNTFP26441 200 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 GMPRP36959 345 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 XCR1P46094 333 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 ZNF33BQ06732 778 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 Q0VFX4 171 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 TGFBIQ15582 683 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 FAM83EQ2M2I3 478 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 ATG9BQ674R7 924 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 IGFL2Q6UWQ7 119 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 RIPOR1Q6ZS17 1223 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 ASPGQ86U10 573 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 THOC6Q86W42 341 aaKnown RBP14.31□□□□□ -0.12
VARS-223ENST00000474643 ZC3H7AQ8IWR0 971 aaKnown RBP14.31□□□□□ -0.12
VARS-223ENST00000474643 TCAIMQ8N3R3 496 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 AMER3Q8N944 861 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 STAG3L4Q8TBR4 150 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 KCTD4Q8WVF5 259 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 KIAA1191Q96A73 305 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 NXNL1Q96CM4 212 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 THAP11Q96EK4 314 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 UBXN10Q96LJ8 280 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 SGPP1Q9BX95 441 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 CNOT10Q9H9A5 744 aaKnown RBP14.31□□□□□ -0.12
VARS-223ENST00000474643 PRM3Q9NNZ6 103 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 ARGLU1Q9NWB6 273 aaPredicted RBP14.31□□□□□ -0.12
VARS-223ENST00000474643 ABI3Q9P2A4 366 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 ERRFI1Q9UJM3 462 aaPredicted RBP14.31□□□□□ -0.12
VARS-223ENST00000474643 NTNG1Q9Y2I2 539 aa14.31□□□□□ -0.12
VARS-223ENST00000474643 A8MUI8 341 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 NDUFS4O43181 175 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 KLHL18O94889 574 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 WISP3O95389 354 aaPredicted RBP14.3□□□□□ -0.12
VARS-223ENST00000474643 NSA2O95478 260 aaKnown RBP14.3□□□□□ -0.12
VARS-223ENST00000474643 NUDT17P0C025 328 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 EDN3P14138 238 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 NPPBP16860 134 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 CCR8P51685 355 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 IRF9Q00978 393 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SLC29A2Q14542 456 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 NAA30Q147X3 362 aaPredicted RBP14.3□□□□□ -0.12
VARS-223ENST00000474643 RASA2Q15283 850 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 OR4D1Q15615 310 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 BTBD16Q32M84 506 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 HIST2H2BCQ6DN03 193 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SULT1C3Q6IMI6 304 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 MAMDC2Q7Z304 686 aaPredicted RBP14.3□□□□□ -0.12
VARS-223ENST00000474643 OR51Q1Q8NH59 317 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SCYL1Q96KG9 808 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 MESP1Q9BRJ9 268 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 TUBB6Q9BUF5 446 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 ZNF700Q9H0M5 742 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 PLA2G3Q9NZ20 509 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms