RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RHBGQ9H310 441 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ACSS2Q9NR19 701 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 SLC22A11Q9NSA0 550 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ZNF282Q9UDV7 671 aaPredicted RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 ADGRE2Q9UHX3 823 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 TCFL5Q9UL49 500 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 STK38LQ9Y2H1 464 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 RNF11Q9Y3C5 154 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 PTRH2Q9Y3E5 179 aaKnown RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 NAALAD2Q9Y3Q0 740 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 H0YIV9 168 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 SGK494L7N484 410 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 NKX2-8O15522 239 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 KLHL18O94889 574 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 MLYCDO95822 493 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ONECUT2O95948 504 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 SERPINB1P30740 379 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 NAGLUP54802 743 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 RAB8AP61006 207 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 NAA20P61599 178 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ASPHQ12797 758 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 HYAL2Q12891 473 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ERV3-1Q14264 604 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 DEFB134Q4QY38 66 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ADNP2Q6IQ32 1131 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 TRIM40Q6P9F5 258 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 CHSY3Q70JA7 882 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 COX15Q7KZN9 410 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 PRSS41Q7RTY9 318 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 HDXQ7Z353 690 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 OR4F6Q8NGB9 312 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 UTP15Q8TED0 518 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 SREK1Q8WXA9 508 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 GAL3ST3Q96A11 431 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 REXO4Q9GZR2 422 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 KLHL31Q9H511 634 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 KCNK9Q9NPC2 374 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 OXSMQ9NWU1 459 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 NXT1Q9UKK6 140 aaKnown RBP11.78□□□□□ -0.52
DDX56-209ENST00000473924 MAP4K5Q9Y4K4 846 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 ACTL7BQ9Y614 415 aa11.78□□□□□ -0.52
DDX56-209ENST00000473924 A0A088AWK7 358 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 CDC14CA4D256 554 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 LRIT2A6NDA9 550 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 PPP6CO00743 305 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 FFAR3O14843 346 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 GPR42O15529 346 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 ERI3O43414 337 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 TYROBPO43914 113 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 SH3BGRLO75368 114 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 RDH16O75452 317 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 TGFB1P01137 390 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 H2AFXP16104 143 aaPredicted RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 ZNF10P21506 573 aaPredicted RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 HNRNPH1P31943 449 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 PIK3CBP42338 1070 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 PLA2G16P53816 162 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 DNAJB13P59910 316 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 SNRPNP63162 240 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 MAT1AQ00266 395 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 TGM3Q08188 693 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 CDC20Q12834 499 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 LCP2Q13094 533 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 IFT88Q13099 833 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 TRAF3Q13114 568 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 PCLAFQ15004 111 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 NKG7Q16617 165 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 SYT16Q17RD7 645 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 FAM69BQ5VUD6 431 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 LIPMQ5VYY2 423 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 SHISA6Q6ZSJ9 500 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 GPRIN3Q6ZVF9 776 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 GPR155Q7Z3F1 870 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 VN1R5Q7Z5H4 357 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 PDSS2Q86YH6 399 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 C10orf107Q8IVU9 208 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 PRSS58Q8IYP2 241 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 AMER3Q8N944 861 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 OR2L5Q8NG80 312 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 OR2Y1Q8NGV0 311 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 ZNF473Q8WTR7 871 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 MIEF2Q96C03 454 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 MS4A6EQ96DS6 147 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 CMTM7Q96FZ5 175 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 MTERF1Q99551 399 aaKnown RBP11.77□□□□□ -0.53
DDX56-209ENST00000473924 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 ELOVL6Q9H5J4 265 aa11.77□□□□□ -0.53
DDX56-209ENST00000473924 SOX17Q9H6I2 414 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms