RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SNX20Q7Z614 316 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RFX6Q8HWS3 928 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 VRK3Q8IV63 474 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CNGA4Q8IV77 575 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CDKL3Q8IVW4 592 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 TXLNBQ8N3L3 684 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TTC30BQ8N4P2 665 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PQLC3Q8N755 202 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PLD5Q8N7P1 536 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RASGEF1AQ8N9B8 481 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TTC29Q8NA56 475 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 Q8NA96 180 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 IPMKQ8NFU5 416 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 GPR150Q8NGU9 434 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SUN3Q8TAQ9 357 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 GSDMBQ8TAX9 411 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ZNF398Q8TD17 642 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PTERQ96BW5 349 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ZG16BQ96DA0 208 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SNRNP40Q96DI7 357 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 CCDC42Q96M95 316 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 NSMCE3Q96MG7 304 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PANX2Q96RD6 677 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 FCRL5Q96RD9 977 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 WDR24Q96S15 920 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 BARD1Q99728 777 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 NUDT9Q9BW91 350 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 WWP1Q9H0M0 922 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 GBA3Q9H227 469 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 LDAHQ9H6V9 325 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ASB8Q9H765 288 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 COG4Q9H9E3 785 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ARFGAP3Q9NP61 516 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 OLAHQ9NV23 265 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 FBXO34Q9NWN3 711 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 UTP6Q9NYH9 597 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 IL17CQ9P0M4 197 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TRIM10Q9UDY6 481 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SLC23A2Q9UGH3 650 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TEKT2Q9UIF3 430 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ERRFI1Q9UJM3 462 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 CDC23Q9UJX2 597 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 INTUQ9ULD6 942 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CAPN11Q9UMQ6 739 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PSMD13Q9UNM6 376 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 WDR37Q9Y2I8 494 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PTRH2Q9Y3E5 179 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 PCYT1BQ9Y5K3 369 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 FAM169AQ9Y6X4 670 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CREBBPQ92793 2442 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 LRRK1Q38SD2 2015 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ZFHX3Q15911 3703 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CRYBG3Q68DQ2 2970 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 A0A087X0T9 212 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TRAV17A0A0B4J275 112 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 GOLGA6L9A6NEM1 432 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 A6NL46 340 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 AGAP14A8MT82 685 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 B5MCH6 92 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 K7EM74 188 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 APOC4-APOC2K7ER74 178 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MAP2K7O14733 419 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PFDN6O15212 129 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PJA2O43164 708 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 LDB2O43679 373 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CST8O60676 142 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 VPS26AO75436 327 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 KLF7O75840 302 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 ZFPL1O95159 310 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 APOC2P02655 101 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PTMAP06454 111 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 CYC1P08574 325 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OR56A5P0C7T3 313 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PIRTP0C851 137 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 FAM228BP0C875 321 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 SKILP12757 684 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ICAM2P13598 275 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MTHFD2P13995 350 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ATP1B2P14415 290 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 POLR2CP19387 275 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 CAPN3P20807 821 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 AGAP20933 346 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 HNRNPH3P31942 346 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 RAB28P51157 221 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 SMSP52788 366 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CTSCP53634 463 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 UBASH3AP57075 661 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 DYNLT1P63172 113 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OTUD4Q01804 1114 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 OCA2Q04671 838 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ABRQ12979 859 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CDC16Q13042 620 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ITIH4Q14624 930 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TMED2Q15363 201 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ZRSR2Q15696 482 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 BEAN1Q3B7T3 259 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms