RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CHMP6Q96FZ7 201 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 KCNC2Q96PR1 638 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 CTRCQ99895 268 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 SIKE1Q9BRV8 207 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 MS4A8Q9BY19 250 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 TRIM55Q9BYV6 548 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 SLC6A16Q9GZN6 736 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 ACTR5Q9H9F9 607 aaPredicted RBP16.06■□□□□ 0.16
CCM2-205ENST00000472223 FARSBQ9NSD9 589 aaKnown RBP16.06■□□□□ 0.16
CCM2-205ENST00000472223 CUTCQ9NTM9 273 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 PCDHB3Q9Y5E6 796 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 PCDHGA8Q9Y5G5 932 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 KNTC1P50748 2209 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 FITM1A5D6W6 292 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 PIP5K1BO14986 540 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 ZNF749O43361 778 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 ERI3O43414 337 aaKnown RBP16.05■□□□□ 0.16
CCM2-205ENST00000472223 HCRTR1O43613 425 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 SH3BGRLO75368 114 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 SEMA3DO95025 777 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 TGDSO95455 350 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 KLK3P07288 261 aaPredicted RBP16.05■□□□□ 0.16
CCM2-205ENST00000472223 PIM1P11309 404 aaPredicted RBP16.05■□□□□ 0.16
CCM2-205ENST00000472223 ARFIP1P53367 373 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 GABREP78334 506 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 FAM53BQ14153 422 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 NR6A1Q15406 480 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 PRTGQ2VWP7 1150 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 ATP6AP1LQ52LC2 224 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 TTLL10Q6ZVT0 673 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 KCT2Q8NC54 265 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 ZCCHC10Q8TBK6 192 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 TUBGCP3Q96CW5 907 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 F2RL3Q96RI0 385 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 HBEGFQ99075 208 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 MACROD1Q9BQ69 325 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 TBCDQ9BTW9 1192 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 ULBP3Q9BZM4 244 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 B3GNT4Q9C0J1 378 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 NRSN2Q9GZP1 204 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 OR51B5Q9H339 312 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 TNFRSF12AQ9NP84 129 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 SLC22A7Q9Y694 548 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 AK5Q9Y6K8 562 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 PTPRBP23467 1997 aa16.05■□□□□ 0.16
CCM2-205ENST00000472223 COL27A1Q8IZC6 1860 aaPredicted RBP16.05■□□□□ 0.16
CCM2-205ENST00000472223 ADAMTS20P59510 1910 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 P2RX6O15547 441 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 HYAL3O43820 417 aaPredicted RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 CPNE3O75131 537 aaKnown RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 RSL1D1O76021 490 aaKnown RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 CCNYL3P0C7X3 344 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ZNF888P0CJ79 500 aaPredicted RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 ALOX12P18054 663 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 AGXTP21549 392 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 LSP1P33241 339 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 SSR2P43308 183 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 TSFMP43897 325 aaKnown RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 HTR6P50406 440 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 PLA2G16P53816 162 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 BTKQ06187 659 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ACSM2AQ08AH3 577 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 UGT3A2Q3SY77 523 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 SPIN4Q56A73 249 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ACSM2BQ68CK6 577 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ADNP2Q6IQ32 1131 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 PWWP2BQ6NUJ5 590 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 TMEM214Q6NUQ4 689 aaKnown RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 PRMT9Q6P2P2 845 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ACAD11Q709F0 780 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 VN1R5Q7Z5H4 357 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 CPLX4Q7Z7G2 160 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 MS4A6EQ96DS6 147 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 MVB12AQ96EY5 273 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 PRR11Q96HE9 360 aaPredicted RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 METTL2AQ96IZ6 378 aaKnown RBP16.04■□□□□ 0.16
CCM2-205ENST00000472223 NUF2Q9BZD4 464 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 APMAPQ9HDC9 416 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 ENAMQ9NRM1 1142 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 PCDHGA3Q9Y5H0 932 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 USH1CQ9Y6N9 552 aa16.04■□□□□ 0.16
CCM2-205ENST00000472223 SAP18O00422 153 aaKnown RBP16.03■□□□□ 0.16
CCM2-205ENST00000472223 DSCR3O14972 297 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 SEC22BO75396 215 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 MAPK1P28482 360 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
CCM2-205ENST00000472223 RAB8AP61006 207 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 BTN3A2P78410 334 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 HMGCS1Q01581 520 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 ABHD18Q0P651 414 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 MAD2L1Q13257 205 aaPredicted RBP16.03■□□□□ 0.16
CCM2-205ENST00000472223 ADPRMQ3LIE5 342 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 OR4C11Q6IEV9 310 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 CYP20A1Q6UW02 462 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 ATG14Q6ZNE5 492 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 NUDT13Q86X67 352 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 PARP9Q8IXQ6 854 aa16.03■□□□□ 0.16
CCM2-205ENST00000472223 RNF175Q8N4F7 328 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms