RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 TMEM251Q8N6I4 163 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.62
LSM2-209ENST00000470083 OR4L1Q8NH43 312 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 LINC01560Q8TB33 94 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 PIGTQ969N2 578 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 TBC1D20Q96BZ9 403 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 MACROD1Q9BQ69 325 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 CNPPD1Q9BV87 410 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 LRRC40Q9H9A6 602 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 ALKBH4Q9NXW9 302 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 KCMF1Q9P0J7 381 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 ERVK-11Q9UQG0 969 aa11.15□□□□□ -0.62
LSM2-209ENST00000470083 MPDZO75970 2070 aa11.15□□□□□ -0.63
LSM2-209ENST00000470083 TRBV11-1A0A0K0K1C0 115 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 ZNF839A8K0R7 811 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 CES2O00748 559 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 IFNA2P01563 188 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 JAK1P23458 1154 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 CTNNA2P26232 953 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 MAGEA5P43359 124 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 MAN2A2P49641 1150 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 SSR4P51571 173 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 PNLIPRP1P54315 467 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 RPS15AP62244 130 aaKnown RBP11.14□□□□□ -0.63
LSM2-209ENST00000470083 NR1I3Q14994 352 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 POU4F3Q15319 338 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 FASTKD1Q53R41 847 aaKnown RBP11.14□□□□□ -0.63
LSM2-209ENST00000470083 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
LSM2-209ENST00000470083 MEI1Q5TIA1 1274 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 GPALPP1Q8IXQ4 340 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 KATNAL2Q8IYT4 538 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 CAMKVQ8NCB2 501 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 APCDD1LQ8NCL9 501 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 NAXEQ8NCW5 288 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 ZCCHC10Q8TBK6 192 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 SMPDL3BQ92485 455 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 THAP11Q96EK4 314 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 ZNF629Q9UEG4 869 aaPredicted RBP11.14□□□□□ -0.63
LSM2-209ENST00000470083 SLC2A6Q9UGQ3 507 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 CAPN11Q9UMQ6 739 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
LSM2-209ENST00000470083 NAALAD2Q9Y3Q0 740 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 PCDHA3Q9Y5H8 950 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.63
LSM2-209ENST00000470083 SLC22A7Q9Y694 548 aa11.14□□□□□ -0.63
LSM2-209ENST00000470083 ZNF860A6NHJ4 632 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 A8MVJ9 347 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 H7BY64 318 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 SMAPO00193 183 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 HCN1O60741 890 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 RBP3P10745 1247 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 ATP5DP30049 168 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 CLCN2P51788 898 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 ACVR1Q04771 509 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 QSOX2Q6ZRP7 698 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 RCOR2Q8IZ40 523 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 FBXW8Q8N3Y1 598 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 KCT2Q8NC54 265 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 OR5T3Q8NGG3 340 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 OR6P1Q8NGX9 317 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 CCDC138Q96M89 665 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 PTCHD1Q96NR3 888 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 PRAP1Q96NZ9 151 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 PANX2Q96RD6 677 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 FAM173AQ9BQD7 235 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 HEMGNQ9BXL5 484 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 P2RY12Q9H244 342 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 LDAHQ9H6V9 325 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 IL1RL2Q9HB29 575 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 FAM114A2Q9NRY5 505 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 HPF1Q9NWY4 346 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 FBXW2Q9UKT8 454 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 RIMKLBQ9ULI2 386 aa11.13□□□□□ -0.63
LSM2-209ENST00000470083 YARS2Q9Y2Z4 477 aaKnown RBP11.13□□□□□ -0.63
LSM2-209ENST00000470083 IGKV3D-11A0A0A0MRZ8 115 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 TCRBV16S1A1N1A0A5B0 115 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 MACROD2A1Z1Q3 448 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 E7ENX8 843 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 CLDN4O14493 209 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 SLC16A8O95907 504 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 CELA3AP09093 270 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
LSM2-209ENST00000470083 HRH2P25021 359 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
LSM2-209ENST00000470083 TTPAP49638 278 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 EIF3EP60228 445 aaKnown RBP11.12□□□□□ -0.63
LSM2-209ENST00000470083 TAP2Q03519 686 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 GBX1Q14549 363 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 SLC10A1Q14973 349 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 HERC3Q15034 1050 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 HYAL4Q2M3T9 481 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 PARP6Q2NL67 630 aa11.12□□□□□ -0.63
LSM2-209ENST00000470083 ASTE1Q2TB18 679 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms