RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GTF3AQ92664 365 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 SPATA13Q96N96 652 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 KCNA7Q96RP8 456 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 OMDQ99983 421 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 SLC46A2Q9BY10 475 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CLEC4MQ9H2X3 399 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CMTM6Q9NX76 183 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 RUVBL2Q9Y230 463 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 U3KQ87 197 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ZNF99A8MXY4 864 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CXorf49A8MYA2 514 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 DLGAP1O14490 977 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CAPN3P20807 821 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 MYL9P24844 172 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 TRHRP34981 398 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 WNT3AP56704 352 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 RPA4Q13156 261 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 MAPKAPK3Q16644 382 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 LRRC38Q5VT99 294 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 APCDD1Q8J025 514 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ANKFN1Q8N957 763 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 OR52K2Q8NGK3 314 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ASB9Q96DX5 294 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 MAP3K3Q99759 626 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 BTBD1Q9H0C5 482 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 DCSTAMPQ9H295 470 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 NECTIN3Q9NQS3 549 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CCM2LQ9NUG4 571 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 ZNF358Q9NW07 568 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 TPRP12270 2363 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CCDC154A6NI56 674 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 GPR37O15354 613 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 STC2O76061 302 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 IPO13O94829 963 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 PRAMEF12O95522 483 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 BPGMP07738 259 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 COX5BP10606 129 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 OXTRP30559 389 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 NNMTP40261 264 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 CSTF1Q05048 431 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 USP10Q14694 798 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 Q7L0L9 218 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 RD3Q7Z3Z2 195 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 LGALS12Q96DT0 336 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 CRB3Q9BUF7 120 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 ABCD2Q9UBJ2 740 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 NDRG2Q9UN36 371 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 PEX16Q9Y5Y5 336 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 TCRBV9S1A1TA0A576 114 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 TCRBV5S1A1TA0A578 114 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 MFSD2BA6NFX1 497 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 GABARAPO95166 117 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 MBP02144 154 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 FTH1P02794 183 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 RAB3BP20337 219 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 FASP25445 335 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 MAT2AP31153 395 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 SMSP52788 366 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 PER3P56645 1201 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 HSF2Q03933 536 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 ESRP1Q6NXG1 681 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 KLHL17Q6TDP4 642 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 Q6ZVU0 165 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 CLHC1Q8NHS4 586 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SLC35B2Q8TB61 432 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 WFDC5Q8TCV5 224 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 MZB1Q8WU39 189 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 MYO19Q96H55 970 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 FUBP3Q96I24 572 aaKnown RBP eCLIP9.6□□□□□ -0.87
NUP50-214ENST00000469163 GLS2Q9UI32 602 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 YBX2Q9Y2T7 364 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 NAALAD2Q9Y3Q0 740 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 ARL5AQ9Y689 179 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 OR6C74A6NCV1 312 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 EIF3GO75821 320 aaKnown RBP eCLIP9.6□□□□□ -0.87
NUP50-214ENST00000469163 CBR1P16152 277 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 RPS9P46781 194 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 EPHA5P54756 1037 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 GP2P55259 537 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 ETFDHQ16134 617 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 OTUD1Q5VV17 481 aaPredicted RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 C3orf33Q6P1S2 294 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 DOK6Q6PKX4 331 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 TRILQ7L0X0 811 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 KRT78Q8N1N4 520 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SNX33Q8WV41 574 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 KCTD13Q8WZ19 329 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SLCO4A1Q96BD0 722 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 PDXPQ96GD0 296 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 NODALQ96S42 347 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms