RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C5orf66Q9H5L9 145 aa4.34□□□□□ -1.71
XRN1-207ENST00000468894 GNB4Q9HAV0 340 aa4.34□□□□□ -1.71
XRN1-207ENST00000468894 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.34□□□□□ -1.71
XRN1-207ENST00000468894 TP53BP1Q12888 1972 aaPredicted RBP4.34□□□□□ -1.71
XRN1-207ENST00000468894 NKX6-3A6NJ46 265 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 NPIPA3F8WFD2 350 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 MOCS2O96007 188 aaPredicted RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 HPRP00739 348 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 HSP90AA1P07900 732 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 DLATP10515 647 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 EEF2P13639 858 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 IFNAR1P17181 557 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 CLCN4P51793 760 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 CD300CQ08708 224 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 MS4A18Q3C1V0 323 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 KLHL10Q6JEL2 608 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 CAVIN1Q6NZI2 390 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 P2RY8Q86VZ1 359 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 DND1Q8IYX4 353 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 TEX26Q8N6G2 289 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 OR9Q2Q8NGE9 314 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 SETD6Q8TBK2 473 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 RASL10AQ92737 203 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 EXOC4Q96A65 974 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 IL12RB2Q99665 862 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 C10orf88Q9H8K7 445 aa4.33□□□□□ -1.72
XRN1-207ENST00000468894 NOCTQ9UK39 431 aaKnown RBP4.33□□□□□ -1.72
XRN1-207ENST00000468894 RNF103O00237 685 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 MLNRO43193 412 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 SELENOFO60613 162 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 MT-ND2P03891 347 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 VIMP08670 466 aaKnown RBP4.32□□□□□ -1.72
XRN1-207ENST00000468894 TSPY3P0CV98 308 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 TSPY8P0CW00 308 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 OXTRP30559 389 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 GPR183P32249 361 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 CAPGP40121 348 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 TSPY1Q01534 308 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 KIAA0141Q14154 515 aaPredicted RBP4.32□□□□□ -1.72
XRN1-207ENST00000468894 TRMT11Q7Z4G4 463 aaKnown RBP4.32□□□□□ -1.72
XRN1-207ENST00000468894 CDC20BQ86Y33 519 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 CREBRFQ8IUR6 639 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 POM121L12Q8N7R1 296 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 OR52B6Q8NGF0 335 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 NPRL2Q8WTW4 380 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 UBE2Q2Q8WVN8 375 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.32□□□□□ -1.72
XRN1-207ENST00000468894 GBP5Q96PP8 586 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 ZNF577Q9BSK1 485 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 UBQLN3Q9H347 655 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 TUBB1Q9H4B7 451 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 GPN1Q9HCN4 374 aaPredicted RBP4.32□□□□□ -1.72
XRN1-207ENST00000468894 PLCL2Q9UPR0 1127 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 SATB2Q9UPW6 733 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 ZHX2Q9Y6X8 837 aa4.32□□□□□ -1.72
XRN1-207ENST00000468894 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 TRAV34A0A0B4J273 112 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 ACOD1A6NK06 481 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 PGRMC2O15173 223 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 SIGLEC5O15389 551 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 HSPA4LO95757 839 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 RPN1P04843 607 aaKnown RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 SP9P0CG40 484 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 PGFP49763 221 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 FKBP3Q00688 224 aaKnown RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 GRB14Q14449 540 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 ZNF774Q6NX45 483 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 METTL23Q86XA0 190 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 CCDC185Q8N715 623 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 OR5M9Q8NGP3 310 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 OR2L2Q8NH16 312 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 PDLIM5Q96HC4 596 aaKnown RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 ZNF597Q96LX8 424 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 TSSK2Q96PF2 358 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 RPF1Q9H9Y2 349 aaKnown RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 PILRAQ9UKJ1 303 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 MRPS18CQ9Y3D5 142 aaKnown RBP4.31□□□□□ -1.72
XRN1-207ENST00000468894 POMT1Q9Y6A1 747 aa4.31□□□□□ -1.72
XRN1-207ENST00000468894 RNF123Q5XPI4 1314 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 TRAFD1O14545 582 aaPredicted RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 POP4O95707 220 aaKnown RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 GOT1P17174 413 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 HOXC13P31276 330 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 OR3A1P47881 315 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 OR3A3P47888 321 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 KRTAP10-3P60369 221 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 ZNF146Q15072 292 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 UPP1Q16831 310 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 SPOUT1Q5T280 376 aaKnown RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 DCLRE1AQ6PJP8 1040 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 MACC1Q6ZN28 852 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 CDHR3Q6ZTQ4 885 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 FAM47EQ6ZV65 393 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 MEX3DQ86XN8 651 aaKnown RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 CORO2AQ92828 525 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms