RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NIPA2Q8N8Q9 360 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 GPRC5AQ8NFJ5 357 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 RNASE8Q8TDE3 154 aaKnown RBP4.46□□□□□ -1.7
LSM5-209ENST00000468872 TMEM190Q8WZ59 177 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 F2RL3Q96RI0 385 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 IDI2Q9BXS1 227 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 P2RY12Q9H244 342 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 TBC1D13Q9NVG8 400 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 FBXW2Q9UKT8 454 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 ALKQ9UM73 1620 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 KIF5CO60282 957 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 OLFM2O95897 454 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 AMBPP02760 352 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 RAF1P04049 648 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 HMBSP08397 361 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 SBK2P0C263 348 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 KRT3P12035 628 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 CHRNB4P30926 498 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 SRD5A2P31213 254 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 CDKN1AP38936 164 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 OR3A3P47888 321 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 CRIP2P52943 208 aaPredicted RBP4.45□□□□□ -1.7
LSM5-209ENST00000468872 GNB1P62873 340 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 FKBP1BP68106 108 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 RPP38P78345 283 aaKnown RBP4.45□□□□□ -1.7
LSM5-209ENST00000468872 TMEM132DQ14C87 1099 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 TEAD2Q15562 447 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 PTPN14Q15678 1187 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 HFEQ30201 348 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 AGAP6Q5VW22 663 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 KCTD11Q693B1 232 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ADAM5Q6NVV9 412 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 DHRS11Q6UWP2 260 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ASPGQ86U10 573 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 CNTN4Q8IWV2 1026 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ZC3H3Q8IXZ2 948 aaKnown RBP4.45□□□□□ -1.7
LSM5-209ENST00000468872 DCLK2Q8N568 766 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 GPATCH11Q8N954 259 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 SMYD1Q8NB12 490 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ST7LQ8TDW4 575 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 GATAD1Q8WUU5 269 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 AZIN2Q96A70 460 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 RFT1Q96AA3 541 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 NXPE2Q96DL1 559 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 NECTIN4Q96NY8 510 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 NEDD4LQ96PU5 975 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ATP6V0BQ99437 205 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 FSD1Q9BTV5 496 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 PITPNM3Q9BZ71 974 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 RPF1Q9H9Y2 349 aaKnown RBP4.45□□□□□ -1.7
LSM5-209ENST00000468872 PANK4Q9NVE7 773 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 DNAJC11Q9NVH1 559 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 C2orf42Q9NWW7 574 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 FBXL4Q9UKA2 621 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ELF5Q9UKW6 265 aaPredicted RBP4.45□□□□□ -1.7
LSM5-209ENST00000468872 ITM2BQ9Y287 266 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 TMED7Q9Y3B3 224 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 KNSTRNQ9Y448 316 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 COLEC10Q9Y6Z7 277 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 RAPGEF6Q8TEU7 1601 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 ADCY10Q96PN6 1610 aa4.45□□□□□ -1.7
LSM5-209ENST00000468872 MLNRO43193 412 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 PNPP00491 289 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 HLA-DPA1P20036 260 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 ELAVL4P26378 380 aaKnown RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 OR3A2P47893 321 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 LEPRP48357 1165 aaKnown RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 DCDC1P59894 354 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 CSNK2BP67870 215 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 NPRL3Q12980 569 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
LSM5-209ENST00000468872 TRA2AQ13595 282 aaKnown RBP eCLIP4.44□□□□□ -1.7
LSM5-209ENST00000468872 CDC37Q16543 378 aaPredicted RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 ARMCX4Q5H9R4 360 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 ALKBH5Q6P6C2 394 aaKnown RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 PRSS42Q7Z5A4 293 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 OR10G8Q8NGN5 311 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 FAM46BQ96A09 425 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 LGALS12Q96DT0 336 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 NKX3-1Q99801 234 aaPredicted RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 NACAP1Q9BZK3 213 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 AKIRIN1Q9H9L7 192 aaPredicted RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 INTS10Q9NVR2 710 aaKnown RBP4.44□□□□□ -1.7
LSM5-209ENST00000468872 RNF186Q9NXI6 227 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 TMOD3Q9NYL9 352 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 NCKAP1Q9Y2A7 1128 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 ARID2Q68CP9 1835 aa4.44□□□□□ -1.7
LSM5-209ENST00000468872 A0A087WW49 117 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 MAGEB16A2A368 324 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 FAM149AA5PLN7 773 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 A8MVM7 634 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 ZNF195O14628 629 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 SAP30O75446 220 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 CFC1P0CG37 223 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms