RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 BARHL1Q9BZE3 327 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 HOXD1Q9GZZ0 328 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 ZDHHC6Q9H6R6 413 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 DBNDD1Q9H9R9 158 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 RAB9BQ9NP90 201 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 ATAD3AQ9NVI7 634 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 SATB2Q9UPW6 733 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 GAB2Q9UQC2 676 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 NCKAP1Q9Y2A7 1128 aa4.41□□□□□ -1.7
GAPVD1-211ENST00000467707 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.7
GAPVD1-211ENST00000467707 IQCMA0A1B0GVH7 501 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TMEM129A0AVI4 362 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 KERAO60938 352 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 NME6O75414 186 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 PRDM1O75626 825 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 OLFM2O95897 454 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 MT-ND2P03891 347 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 MYOGP15173 224 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 STMN1P16949 149 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 CTNNA2P26232 953 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 SRD5A2P31213 254 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC1A3P43003 542 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 MAGEB1P43366 347 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 NR0B1P51843 470 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 NME5P56597 212 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 CSNK2BP67870 215 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 FKBP1BP68106 108 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 CYCSP99999 105 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 C17orf67Q0P5P2 114 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TRA2AQ13595 282 aaKnown RBP eCLIP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TMEM132DQ14C87 1099 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 DUSP5Q16690 384 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 HLA-BQ31612 363 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 WLSQ5T9L3 541 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC27A4Q6P1M0 643 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 CD164L2Q6UWJ8 174 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 USP43Q70EL4 1123 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TRMT11Q7Z4G4 463 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TMEM126BQ8IUX1 230 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 KLHDC8BQ8IXV7 354 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TDHQ8IZJ6 230 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TEX26Q8N6G2 289 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 ULK4Q96C45 1275 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 ATP6V0BQ99437 205 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 ACAT2Q9BWD1 397 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 CLEC7AQ9BXN2 247 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 OSBPL8Q9BZF1 889 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC39A8Q9C0K1 460 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 ZNF696Q9H7X3 374 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 FGF22Q9HCT0 170 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 TMOD3Q9NYL9 352 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 ZNF510Q9Y2H8 683 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 KIAA1210Q9ULL0 1709 aa4.4□□□□□ -1.71
GAPVD1-211ENST00000467707 A0A087WZ39 114 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 SMIM30A4D0T7 59 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PRR23AA6NEV1 266 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 SURF4O15260 269 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 LINC01565O15544 149 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 NXPH2O95156 264 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 SBK2P0C263 348 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 THEGLP0DJG4 465 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 CPA3P15088 417 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 MT3P25713 68 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 LCP2Q13094 533 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PPP2R5CQ13362 524 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 FAM106AQ4KMX7 169 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 ADAMTSL4-AS1Q5T5F5 129 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PRAMEF8Q5VWM4 474 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PWWP2BQ6NUJ5 590 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PLBD1Q6P4A8 553 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 ARHGAP11AQ6P4F7 1023 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 Q6ZSR9 355 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 LAX1Q8IWV1 398 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 HCAR2Q8TDS4 363 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 SEPT8Q92599 483 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 GGHQ92820 318 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 SNX21Q969T3 373 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 CCDC47Q96A33 483 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 RFT1Q96AA3 541 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PCDHB18PQ96TA0 734 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 LITAFQ99732 161 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 CCM2Q9BSQ5 444 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PRMT8Q9NR22 394 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 HMG20BQ9P0W2 317 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 DBF4Q9UBU7 674 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 PPP1R3CQ9UQK1 317 aa4.39□□□□□ -1.71
GAPVD1-211ENST00000467707 A0A0A6YYC8 382 aaPredicted RBP4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 hCG_38984A0A1B0GV85 526 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 TCP10L2B9ZVM9 353 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 H0YIG0 161 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 I3L1I5 382 aaPredicted RBP4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 GAS8O95995 478 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 ATP6V1E1P36543 226 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 SOX3P41225 446 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 ADARP55265 1226 aaKnown RBP4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 XGP55808 180 aa4.38□□□□□ -1.71
GAPVD1-211ENST00000467707 PMP22Q01453 160 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms