RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 TMEM184BQ9Y519 407 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 TIMM22Q9Y584 194 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 DNAJC15Q9Y5T4 150 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 WDFY3Q8IZQ1 3526 aa14.46□□□□□ -0.1
NPHP4-205ENST00000466897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 SLCO1B7G3V0H7 640 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 DSCR3O14972 297 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 TIAF1O95411 115 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 ONECUT2O95948 504 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 RBMS1P29558 406 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 HNRNPH1P31943 449 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 RORAP35398 523 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 SKP1P63208 163 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 TGM3Q08188 693 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 ABRAXAS2Q15018 415 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 HERC3Q15034 1050 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 TCHHL1Q5QJ38 904 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 DEPDC1Q5TB30 811 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 NUP210LQ5VU65 1888 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 KHDRBS2Q5VWX1 349 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 CLEC6AQ6EIG7 209 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 PRMT9Q6P2P2 845 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 KCT2Q8NC54 265 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 OR2L5Q8NG80 312 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 TWIST2Q8WVJ9 160 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 PMEPA1Q969W9 287 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 METTL2AQ96IZ6 378 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 CTRCQ99895 268 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 DPH2Q9BQC3 489 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 REXO4Q9GZR2 422 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 AICDAQ9GZX7 198 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 CLK4Q9HAZ1 481 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 FARSBQ9NSD9 589 aaKnown RBP14.45□□□□□ -0.1
NPHP4-205ENST00000466897 CUTCQ9NTM9 273 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 NMRK1Q9NWW6 199 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 SCN3AQ9NY46 2000 aa14.45□□□□□ -0.1
NPHP4-205ENST00000466897 A0A088AWK7 358 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 A0A1B0GX78 115 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 AGRPO00253 132 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 DLGAP3O95886 979 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 SERPIND1P05546 499 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF10P21506 573 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 PRPH2P23942 346 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 HTR6P50406 440 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 NEK2P51955 445 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 RPS13P62277 151 aaKnown RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 DDX39BQ13838 428 aaKnown RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 TOR1AIP1Q5JTV8 583 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF385CQ66K41 422 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 TRIM40Q6P9F5 258 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 FOXR1Q6PIV2 292 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 CRLF3Q8IUI8 442 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 PIWIL2Q8TC59 973 aaKnown RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 UTP15Q8TED0 518 aaKnown RBP14.44□□□□□ -0.1
NPHP4-205ENST00000466897 CCT6BQ92526 530 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 KCNC2Q96PR1 638 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 ACPTQ9BZG2 426 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 ULBP3Q9BZM4 244 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 TUBB1Q9H4B7 451 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 THSD1Q9NS62 852 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 STARD5Q9NSY2 213 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 VTI1BQ9UEU0 232 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 CDC14AQ9UNH5 594 aa14.44□□□□□ -0.1
NPHP4-205ENST00000466897 SEC16AO15027 2179 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 TRABD2BA6NFA1 517 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 TMEM233B4DJY2 109 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 H0YIG0 161 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 SLC28A1O00337 649 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 RSL1D1O76021 490 aaKnown RBP14.43□□□□□ -0.1
NPHP4-205ENST00000466897 STK17BO94768 372 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 SCELO95171 688 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 MED26O95402 600 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 NSA2O95478 260 aaKnown RBP14.43□□□□□ -0.1
NPHP4-205ENST00000466897 TGFB1P01137 390 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ALOX12P18054 663 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 GUCY1A3Q02108 690 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 XKR7Q5GH72 579 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ABHD17CQ6PCB6 329 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF517Q6ZMY9 492 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-205ENST00000466897 LRRC34Q8IZ02 419 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 DSELQ8IZU8 1212 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 AGR3Q8TD06 166 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF578Q96N58 590 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-205ENST00000466897 GBP5Q96PP8 586 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 MACROD1Q9BQ69 325 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 TBCDQ9BTW9 1192 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 FAM117AQ9C073 453 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 SLC7A5P2Q9GIP4 190 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ROGDIQ9GZN7 287 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 KLHL31Q9H511 634 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ANKHQ9HCJ1 492 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 SLCO1B3Q9NPD5 702 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 TXLNGQ9NUQ3 528 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 SIRT5Q9NXA8 310 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 AHSPQ9NZD4 102 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 FOXJ2Q9P0K8 574 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 VPS29Q9UBQ0 182 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 ADAM29Q9UKF5 820 aa14.43□□□□□ -0.1
NPHP4-205ENST00000466897 CCL27Q9Y4X3 112 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms