RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 HOXD1Q9GZZ0 328 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 ILKAPQ9H0C8 392 aaPredicted RBP3.34□□□□□ -1.87
SORT1-202ENST00000466471 XYLT2Q9H1B5 865 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 IKZF4Q9H2S9 585 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 C12orf65Q9H3J6 166 aaKnown RBP3.34□□□□□ -1.87
SORT1-202ENST00000466471 FZD8Q9H461 694 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 COG4Q9H9E3 785 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 LRRC4Q9HBW1 653 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 APOBEC3GQ9HC16 384 aaKnown RBP3.34□□□□□ -1.87
SORT1-202ENST00000466471 TMEM9BQ9NQ34 198 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 SLC35C2Q9NQQ7 365 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 AGPAT4Q9NRZ5 378 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 SEPT11Q9NVA2 429 aaKnown RBP3.34□□□□□ -1.87
SORT1-202ENST00000466471 DKK3Q9UBP4 350 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 CHORDC1Q9UHD1 332 aaPredicted RBP3.34□□□□□ -1.87
SORT1-202ENST00000466471 STEAP1Q9UHE8 339 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 KCND3Q9UK17 655 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 RAP2CQ9Y3L5 183 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 HEY1Q9Y5J3 304 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 UBIAD1Q9Y5Z9 338 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 IRAK3Q9Y616 596 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 PCSK5Q92824 1860 aa3.34□□□□□ -1.87
SORT1-202ENST00000466471 GREB1LQ9C091 1923 aaPredicted RBP3.34□□□□□ -1.88
SORT1-202ENST00000466471 DOCK6Q96HP0 2047 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 SPAARA0A1B0GVQ0 90 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CCDC160A6NGH7 325 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 NPIPB15A6NHN6 443 aaPredicted RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 SH2D7A6NKC9 451 aaPredicted RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 BBIP1A8MTZ0 92 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 A8MVJ9 347 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 KPNA7A9QM74 516 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 PTGES3LE9PB15 166 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 GOLGA8RI6L899 631 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 SGK1O00141 431 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 UBE2CO00762 179 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 MCF2LO15068 1137 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 MDM4O15151 490 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CLOCKO15516 846 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 MSI1O43347 362 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 GRID2O43424 1007 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 TNFSF14O43557 240 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CACNG3O60359 315 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 SORBS2O94875 1100 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 GABARAPO95166 117 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HSPA4LO95757 839 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HPRP00739 348 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ASS1P00966 412 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 NPPAP01160 153 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 GPIP06744 558 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 MCF2P10911 925 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ATP6V1B1P15313 513 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 IL1RNP18510 177 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CD58P19256 250 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HK1P19367 917 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ITIH1P19827 911 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ITGALP20701 1170 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 IMPDH1P20839 514 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 JAK1P23458 1154 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ITPKBP27987 946 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 TKTP29401 623 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 HOXA6P31267 233 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 UQCRC1P31930 480 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ACSL1P33121 698 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HTR7P34969 479 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 IDUAP35475 653 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 UGT2B10P36537 528 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 NUDT1P36639 197 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 GP5P40197 560 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ETV6P41212 452 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 MC3RP41968 323 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 QARSP47897 775 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 KRT6CP48668 564 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 RPL34P49207 117 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 GATMP50440 423 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 RPL14P50914 215 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 AFF3P51826 1226 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 TKTL1P51854 596 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 PRKAG1P54619 331 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 RAD23AP54725 363 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CSE1LP55060 971 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 EIF3EP60228 445 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CXCR4P61073 352 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 GAD2Q05329 585 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 BST2Q10589 180 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 BNIP2Q12982 314 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 FADDQ13158 208 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 PMS2P3Q13401 168 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HTR4Q13639 388 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HLXQ14774 488 aaPredicted RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 PSMD5Q16401 504 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 CYP2A13Q16696 494 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 HSDL1Q3SXM5 330 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ZIK1Q3SY52 487 aaPredicted RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 CYBRD1Q53TN4 286 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 ZNF766Q5HY98 468 aa3.33□□□□□ -1.88
SORT1-202ENST00000466471 AARS2Q5JTZ9 985 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 SAMD4BQ5PRF9 694 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 RBM48Q5RL73 367 aaKnown RBP3.33□□□□□ -1.88
SORT1-202ENST00000466471 PHF19Q5T6S3 580 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms