RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 BMXP51813 675 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 NPTX1Q15818 432 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 PRSS53Q2L4Q9 553 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 FAM180BQ6P0A1 224 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 FAM83HQ6ZRV2 1179 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 LAS2Q8IYD9 372 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 LRRC56Q8IYG6 542 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 C12orf76Q8N812 135 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 FBXO15Q8NCQ5 510 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 C11orf65Q8NCR3 313 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 ABTB1Q969K4 478 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 REPS1Q96D71 796 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 TRIM39Q9HCM9 518 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 TMEM184CQ9NVA4 438 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 ADPRHL2Q9NX46 363 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 ZNF282Q9UDV7 671 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 ATP6V1HQ9UI12 483 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 NDRG4Q9ULP0 352 aaKnown RBP8.59□□□□□ -1.03
SYNE1-217ENST00000466159 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 DGKBQ9Y6T7 804 aa8.59□□□□□ -1.03
SYNE1-217ENST00000466159 PLXND1Q9Y4D7 1925 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ZNF99A8MXY4 864 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 FOXE1O00358 373 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 HOXC11O43248 304 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PFDN1O60925 122 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 NDUFS2O75306 463 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ADH1CP00326 375 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 C9P02748 559 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 KLK1P06870 262 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 HNRNPA1P09651 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 FURINP09958 794 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ADRB3P13945 408 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PPIBP23284 216 aaKnown RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ITGB7P26010 798 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PCGF2P35227 344 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 RANBP1P43487 201 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 OR1E2P47887 323 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 TAS2R50P59544 299 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SLC35A2P78381 396 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 C2orf80Q0P641 193 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ZNF829Q3KNS6 432 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 CYP27C1Q4G0S4 372 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 FAHD1Q6P587 224 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 NXPE4Q6UWF7 544 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 Q6ZPB1 254 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 FAM124AQ86V42 546 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ETFBKMTQ8IXQ9 262 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 MMP21Q8N119 569 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 OR5AK3PQ8NH89 298 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SPPL2AQ8TCT8 520 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 WFIKKN2Q8TEU8 576 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 C16orf78Q8WTQ4 265 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SLC5A11Q8WWX8 675 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 WDR34Q96EX3 536 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SLC35A5Q9BS91 424 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 DOHHQ9BU89 302 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 EFCAB11Q9BUY7 163 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ACAT2Q9BWD1 397 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SPATA9Q9BWV2 254 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SORBS1Q9BX66 1292 aaKnown RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 BHLHE41Q9C0J9 482 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 DUSP21Q9H596 190 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ENPP5Q9UJA9 477 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 CORO2BQ9UQ03 480 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SLC27A6Q9Y2P4 619 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 TESMINQ9Y4I5 508 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PCDHGA10Q9Y5H3 936 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 JUNDP17535 347 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ACADLP28330 430 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 GSSP48637 474 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PNLIPRP1P54315 467 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SELENOWP63302 87 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 RPP38P78345 283 aaKnown RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 NPRL3Q12980 569 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 CAMK2GQ13555 558 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 MAD2L1BPQ15013 274 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 CTF1Q16619 201 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 MOGQ16653 247 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 HNRNPA1L2Q32P51 320 aaKnown RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PAGE2BQ5JRK9 111 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 KIAA1614Q5VZ46 1190 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 CCDC81Q6ZN84 652 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 RTL10Q7L3V2 364 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 TSPYL5Q86VY4 417 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PARP8Q8N3A8 854 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PLA2G15Q8NCC3 412 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ZNF540Q8NDQ6 660 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 MIPOL1Q8TD10 442 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-217ENST00000466159 OR8D1Q8WZ84 308 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 BADQ92934 168 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 PPCDCQ96CD2 204 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 APOL4Q9BPW4 351 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 ZDHHC5Q9C0B5 715 aa8.58□□□□□ -1.04
SYNE1-217ENST00000466159 RAD21L1Q9H4I0 556 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms