RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 IGFL3Q6UXB1 125 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 TMIGD1Q6UXZ0 262 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CEP128Q6ZU80 1094 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 NDUFAF7Q7L592 441 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 VN1R5Q7Z5H4 357 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 PLD6Q8N2A8 252 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 TBC1D19Q8N5T2 526 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 PEX11GQ96HA9 241 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 SMIM10Q96HG1 83 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 RHOXF2Q9BQY4 288 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CD244Q9BZW8 370 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CNOT10Q9H9A5 744 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 LANCL2Q9NS86 450 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 C5AR2Q9P296 337 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 ASH1LQ9NR48 2969 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 SCN2AQ99250 2005 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 NSG1A0A0A6YYJ2 146 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 TTLL8A6PVC2 850 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
XRN1-203ENST00000463916 DPM1O60762 260 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 IPO13O94829 963 aaKnown RBP12.24□□□□□ -0.45
XRN1-203ENST00000463916 FAM153BP0C7A2 387 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 CXCR2P25025 360 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 TYK2P29597 1187 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 KCNC4Q03721 635 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 DOC2AQ14183 400 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 PCOLCEQ15113 449 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 PDK4Q16654 411 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 FAM153CQ494X1 144 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 PRR30Q53SZ7 412 aaPredicted RBP12.24□□□□□ -0.45
XRN1-203ENST00000463916 MFSD4BQ5TF39 518 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 SNX31Q8N9S9 440 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 TRPV3Q8NET8 790 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 PSMF1Q92530 271 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 PAFAH2Q99487 392 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 LHPPQ9H008 270 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 ZNF358Q9NW07 568 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 GPRC5BQ9NZH0 403 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 COPG2Q9UBF2 871 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
XRN1-203ENST00000463916 CNTRLQ7Z7A1 2325 aa12.24□□□□□ -0.45
XRN1-203ENST00000463916 A0A087X1B8 175 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 POC1B-GALNT4F8VUJ3 575 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 CHST10O43529 356 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 H2AFYO75367 372 aaKnown RBP12.23□□□□□ -0.45
XRN1-203ENST00000463916 SUPT3HO75486 399 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 ALPPP05187 535 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 SERPINA6P08185 405 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 C8orf89P0DMQ9 161 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 HNRNPH1P31943 449 aaKnown RBP12.23□□□□□ -0.45
XRN1-203ENST00000463916 XKR6Q5GH73 641 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 WDR34Q96EX3 536 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 A0A0G2JN53 185 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 LRIT2A6NDA9 550 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 LRRC14BA6NHZ5 514 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 WFS1O76024 890 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 KLHL2O95198 593 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 INHBAP08476 426 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 PRR35P0CG20 571 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 MAGEA12P43365 314 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 SERPINB8P50452 374 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 RHAGQ02094 409 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 FAM83EQ2M2I3 478 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 TOR1AIP1Q5JTV8 583 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 AGAP7PQ5VUJ5 663 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 ABHD13Q7L211 337 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 RHEBL1Q8TAI7 183 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 MIB2Q96AX9 1013 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 IMMP1LQ96LU5 166 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 AGAP4Q96P64 663 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 CAPS2Q9BXY5 557 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 VPS11Q9H270 941 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 EHD1Q9H4M9 534 aa12.23□□□□□ -0.45
XRN1-203ENST00000463916 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 FAM227AF5H4B4 570 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 CLGNO14967 610 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 SEC24DO94855 1032 aaPredicted RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 GCAP28676 217 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 CHIT1Q13231 466 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 ACAP2Q15057 778 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 PFKFB4Q16877 469 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 LINC00696Q6ZRV3 163 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 HPS6Q86YV9 775 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 KBTBD2Q8IY47 623 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 BRIX1Q8TDN6 353 aaKnown RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 TSLPQ969D9 159 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 ISL2Q96A47 359 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 TBC1D20Q96BZ9 403 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 MS4A6EQ96DS6 147 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 PTCD3Q96EY7 689 aaKnown RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms