RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CEACAM1P13688 526 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 ACPPP15309 386 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 EMP3P54852 163 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 ERVK-8P63133 956 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 NR6A1Q15406 480 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 IMPG1Q17R60 797 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 TMEM198Q66K66 360 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 ABHD17CQ6PCB6 329 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 ACAD11Q709F0 780 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 DGLUCYQ7Z3D6 616 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SPATA19Q7Z5L4 167 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 CACTIN-AS1Q8N1I8 211 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 CSNK1A1LQ8N752 337 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 OR2L5Q8NG80 312 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 OR1L3Q8NH93 324 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 QRFPRQ96P65 431 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 MRPL1Q9BYD6 325 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 REXO4Q9GZR2 422 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SPRTNQ9H040 489 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SYNDIG1Q9H7V2 258 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 MRPS2Q9Y399 296 aaKnown RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SLC22A7Q9Y694 548 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SPEGQ15772 3267 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 SPTBP11277 2137 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 CFAP54Q96N23 3096 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SPAARA0A1B0GVQ0 90 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 TXNDC9O14530 226 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SEC22BO75396 215 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SCELO95171 688 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 MED26O95402 600 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 FTH1P19P0C7X4 201 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 MRPL19P49406 292 aaKnown RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 ARL4DP49703 201 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 RGS1Q08116 209 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 TERF2Q15554 542 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 GPR19Q15760 415 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 ISXQ2M1V0 245 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 TOR1AIP1Q5JTV8 583 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 PHF19Q5T6S3 580 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 DHRS13Q6UX07 377 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 COMMD6Q7Z4G1 85 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 AGBL5Q8NDL9 886 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 RERGQ96A58 199 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 RGMAQ96B86 450 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 RILPQ96NA2 401 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 TEFMQ96QE5 360 aaKnown RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 ZMYND15Q9H091 742 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 DDX31Q9H8H2 851 aaKnown RBP13.65□□□□□ -0.22
COL6A1-202ENST00000463060 FGF21Q9NSA1 209 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 STARD5Q9NSY2 213 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 DLGAP4Q9Y2H0 992 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 TMED5Q9Y3A6 229 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 GPR45Q9Y5Y3 372 aa13.65□□□□□ -0.22
COL6A1-202ENST00000463060 E9PBE3 544 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 KLHL41O60662 606 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 EEDO75530 441 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 MT-CO3P00414 261 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SERPIND1P05546 499 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 TPP2P29144 1249 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 TSFMP43897 325 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 DIO3P55073 304 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 CLDN6P56747 220 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 STXBP1P61764 594 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 ACY1Q03154 408 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SPIN4Q56A73 249 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 GARNL3Q5VVW2 1013 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 IL23RQ5VWK5 629 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 NXNQ6DKJ4 435 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 OR4C11Q6IEV9 310 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 NOXRED1Q6NXP6 359 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 ZNF793Q6ZN11 406 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 PARP9Q8IXQ6 854 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 CPSF7Q8N684 471 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 AMER3Q8N944 861 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SRFBP1Q8NEF9 429 aaKnown RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 GAL3ST3Q96A11 431 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 C10orf90Q96M02 699 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 TBCDQ9BTW9 1192 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 MYLK2Q9H1R3 596 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SAR1AQ9NR31 198 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 OCIAD1Q9NX40 245 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms