RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CDC123O75794 336 aaPredicted RBP17.84■□□□□ 0.45
VARS-220ENST00000461874 B3GALT4O96024 378 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 FHP07954 510 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 ZNF888P0CJ79 500 aaPredicted RBP17.84■□□□□ 0.45
VARS-220ENST00000461874 SLC12A2P55011 1212 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 C2orf54Q08AI8 447 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 INAQ16352 499 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 SFT2D3Q587I9 215 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 H3F3CQ6NXT2 135 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 FRA10AC1Q70Z53 315 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 ABHD13Q7L211 337 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 KLHDC8AQ8IYD2 350 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 TRPV3Q8NET8 790 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 CDKL2Q92772 493 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 RHBDF1Q96CC6 855 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 MAGEB10Q96LZ2 347 aaPredicted RBP17.84■□□□□ 0.45
VARS-220ENST00000461874 C5orf34Q96MH7 638 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 TAAR6Q96RI8 345 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 SLX1AQ9BQ83 275 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 SLC6A16Q9GZN6 736 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 CAB39LQ9H9S4 337 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 OLAHQ9NV23 265 aa17.84■□□□□ 0.45
VARS-220ENST00000461874 TCRBV9S1A1TA0A576 114 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 OR5H15A6NDH6 313 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 SMIM10L1P0DMW3 83 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 GDF5P43026 501 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 SLC6A12P48065 614 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 OLR1P78380 273 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 ZNF33BQ06732 778 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 ACTN3Q08043 901 aaPredicted RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 HYAL2Q12891 473 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 RBBP5Q15291 538 aaKnown RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 EXT1Q16394 746 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 C18orf21Q32NC0 220 aaPredicted RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 C4orf17Q53FE4 359 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 ZNF324BQ6AW86 544 aaPredicted RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 HIST2H2BCQ6DN03 193 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 PAPD4Q6PIY7 484 aaKnown RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 C3orf62Q6ZUJ4 267 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 M1APQ8TC57 530 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 CREB3L4Q8TEY5 395 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 TSLPQ969D9 159 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 SMIM10Q96HG1 83 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 CPNE1Q99829 537 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 KLHL31Q9H511 634 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 CLK4Q9HAZ1 481 aaKnown RBP17.83■□□□□ 0.44
VARS-220ENST00000461874 TXNDC16Q9P2K2 825 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 UNC79Q9P2D8 2635 aa17.83■□□□□ 0.44
VARS-220ENST00000461874 URADA6NGE7 173 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 WDR47O94967 919 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 C1QAP02745 245 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 SERPINA6P08185 405 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 GSTA2P09210 222 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 GNAZP19086 355 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 JAK1P23458 1154 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 CASQ1P31415 396 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 HNF4AP41235 474 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 GPX6P59796 221 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 RAB8AP61006 207 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 ETF1P62495 437 aaKnown RBP17.82■□□□□ 0.44
VARS-220ENST00000461874 USP10Q14694 798 aaKnown RBP17.82■□□□□ 0.44
VARS-220ENST00000461874 TGFBIQ15582 683 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 SLCO4C1Q6ZQN7 724 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 C17orf53Q8N3J3 647 aaPredicted RBP17.82■□□□□ 0.44
VARS-220ENST00000461874 SPATA6LQ8N4H0 392 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 ZNF354BQ96LW1 612 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 LPAR4Q99677 370 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 GPR22Q99680 433 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 RBBP8Q99708 897 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 UNKQ9C0B0 810 aaKnown RBP17.82■□□□□ 0.44
VARS-220ENST00000461874 KCNK13Q9HB14 408 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 MMP25Q9NPA2 562 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 UTP11Q9Y3A2 253 aaKnown RBP17.82■□□□□ 0.44
VARS-220ENST00000461874 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
VARS-220ENST00000461874 SCN2AQ99250 2005 aa17.82■□□□□ 0.44
VARS-220ENST00000461874 A1L4Q6 167 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 NCF1BA6NI72 391 aaPredicted RBP17.81■□□□□ 0.44
VARS-220ENST00000461874 NCF1CA8MVU1 366 aaPredicted RBP17.81■□□□□ 0.44
VARS-220ENST00000461874 PHGDHO43175 533 aaKnown RBP17.81■□□□□ 0.44
VARS-220ENST00000461874 PRAMEF2O60811 474 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 B4GALT2O60909 372 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 H2AFYO75367 372 aaKnown RBP17.81■□□□□ 0.44
VARS-220ENST00000461874 CCDC166P0CW27 439 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 C1GALT1C1LP0DN25 315 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 MYBL2P10244 700 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 NCF1P14598 390 aaPredicted RBP17.81■□□□□ 0.44
VARS-220ENST00000461874 GP5P40197 560 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 PLTPP55058 493 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 OR4D2P58180 307 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 ACER2Q5QJU3 275 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 FCRLBQ6BAA4 426 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 SUN3Q8TAQ9 357 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 NR4A3Q92570 626 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 PHACTR1Q9C0D0 580 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 AICDAQ9GZX7 198 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 OSGIN2Q9Y236 505 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 ZGRF1Q86YA3 2104 aa17.81■□□□□ 0.44
VARS-220ENST00000461874 C4orf51C9J302 202 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms