RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 PYCARDQ9ULZ3 195 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SLC22A14Q9Y267 594 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 OARD1Q9Y530 152 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 PCDHGB6Q9Y5F9 930 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 KCNE2Q9Y6J6 123 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 NOTCH2Q04721 2471 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 IGHV3-20A0A0C4DH32 117 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 OR5H15A6NDH6 313 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 OR2W5A6NFC9 320 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 NDUFS4O43181 175 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CHST10O43529 356 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 DNAJB6O75190 326 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 RDH16O75452 317 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SEC24DO94855 1032 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-207ENST00000461798 C1QAP02745 245 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 FHP07954 510 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SERPINA6P08185 405 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 STSP08842 583 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 GGT5P36269 586 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SLC6A12P48065 614 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 TDGF1P3P51864 188 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 POU4F1Q01851 419 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 RGS1Q08116 209 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 HYAL2Q12891 473 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 NSDHLQ15738 373 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 EXT1Q16394 746 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ACER2Q5QJU3 275 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 FAM180AQ6UWF9 173 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SLCO4C1Q6ZQN7 724 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 MAMDC2Q7Z304 686 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-207ENST00000461798 MAATS1Q7Z4T9 603 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ADAMTSL2Q86TH1 951 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CEP97Q8IW35 865 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 LGI4Q8N135 537 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 AMER2Q8N7J2 671 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ANKRD53Q8N9V6 530 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SPATA4Q8NEY3 305 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 OR5T3Q8NGG3 340 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 UTP15Q8TED0 518 aaKnown RBP8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CREB3L4Q8TEY5 395 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ANKRD49Q8WVL7 239 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 NR4A3Q92570 626 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
BRCA1-207ENST00000461798 RELTQ969Z4 430 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 PEX11GQ96HA9 241 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 AIF1LQ9BQI0 150 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CAPS2Q9BXY5 557 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 DERL2Q9GZP9 239 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 NT5DC2Q9H857 520 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 OLAHQ9NV23 265 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 ABI3Q9P2A4 366 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 COPG2Q9UBF2 871 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CTNNAL1Q9UBT7 734 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 MTO1Q9Y2Z2 717 aaKnown RBP8.62□□□□□ -1.03
BRCA1-207ENST00000461798 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
BRCA1-207ENST00000461798 CTAGE15A4D2H0 777 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 NPEPPSL1A6NEC2 478 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 URADA6NGE7 173 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 A8MUI8 341 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 PRAMEF2O60811 474 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 H2AFYO75367 372 aaKnown RBP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 CLDN1O95832 211 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GSTA2P09210 222 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GNAZP19086 355 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 SAT1P21673 171 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 JAK1P23458 1154 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GSTM2P28161 218 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 CALCOCO2Q13137 446 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF460Q14592 562 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 USP10Q14694 798 aaKnown RBP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 ABRAXAS2Q15018 415 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 TSNQ15631 228 aaKnown RBP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 MEP1AQ16819 746 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 BTBD16Q32M84 506 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 DEFB134Q4QY38 66 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 MFSD4BQ5TF39 518 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 PAPD4Q6PIY7 484 aaKnown RBP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 CTAGE6Q86UF2 777 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 TCAIMQ8N3R3 496 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 ELP5Q8TE02 316 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 PYROXD1Q8WU10 500 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 RHBDF1Q96CC6 855 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 UBXN10Q96LJ8 280 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 LPAR4Q99677 370 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 PHACTR1Q9C0D0 580 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 PITHD1Q9GZP4 211 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GPAMQ9HCL2 828 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GPRC5BQ9NZH0 403 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 GRHL1Q9NZI5 618 aa8.61□□□□□ -1.03
BRCA1-207ENST00000461798 OSGIN2Q9Y236 505 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms