RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 URADA6NGE7 173 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 ZNF888P0CJ79 500 aaPredicted RBP21.42■■□□□ 1.02
PTPN4-207ENST00000460162 PDIA2Q13087 525 aaKnown RBP21.42■■□□□ 1.02
PTPN4-207ENST00000460162 ZNF766Q5HY98 468 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 FCRLBQ6BAA4 426 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 ADAMTSL2Q86TH1 951 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 FJX1Q86VR8 437 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 THOC6Q86W42 341 aaKnown RBP21.42■■□□□ 1.02
PTPN4-207ENST00000460162 CRLF3Q8IUI8 442 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 SLC5A8Q8N695 610 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 TRPV3Q8NET8 790 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 RELTQ969Z4 430 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 SLC6A16Q9GZN6 736 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 POPDC3Q9HBV1 291 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 OARD1Q9Y530 152 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 KCNE2Q9Y6J6 123 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 MYO9AB2RTY4 2548 aa21.42■■□□□ 1.02
PTPN4-207ENST00000460162 EFCAB8A8MWE9 144 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 CDC7O00311 574 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 CHST10O43529 356 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 ZG16O60844 167 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 SAT1P21673 171 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 PAFAH1B1P43034 410 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 HNMTP50135 292 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 OR4D2P58180 307 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 TAS2R50P59544 299 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 ACTN3Q08043 901 aaPredicted RBP21.41■■□□□ 1.02
PTPN4-207ENST00000460162 CBLBQ13191 982 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 TUBA3CQ13748 450 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 ZNF460Q14592 562 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 FASTKD3Q14CZ7 662 aaKnown RBP21.41■■□□□ 1.02
PTPN4-207ENST00000460162 C1QL3Q5VWW1 255 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 TUBA3EQ6PEY2 450 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 QSOX2Q6ZRP7 698 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 ANKRD53Q8N9V6 530 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 MDS2Q8NDY4 140 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 UTP15Q8TED0 518 aaKnown RBP21.41■■□□□ 1.02
PTPN4-207ENST00000460162 VPS39Q96JC1 886 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 EGFL8Q99944 293 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 TRIM31Q9BZY9 425 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 RHOJQ9H4E5 214 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 RNF14Q9UBS8 474 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 SLC22A14Q9Y267 594 aa21.41■■□□□ 1.02
PTPN4-207ENST00000460162 UNC5CO95185 931 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 MST1P26927 711 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 SLC26A5P58743 744 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 TAS2R39P59534 338 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 OLR1P78380 273 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.4■■□□□ 1.02
PTPN4-207ENST00000460162 NXPE4Q6UWF7 544 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 FRA10AC1Q70Z53 315 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 SLC34A3Q8N130 599 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 NPAS2Q99743 824 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 UTP23Q9BRU9 249 aaKnown RBP21.4■■□□□ 1.02
PTPN4-207ENST00000460162 SEC14L3Q9UDX4 400 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 CACNA1DQ01668 2161 aa21.4■■□□□ 1.02
PTPN4-207ENST00000460162 CDK2AP1O14519 115 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 LURAP1LQ8IV03 231 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 ZBED8Q8IZ13 594 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 BBOF1Q8ND07 529 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 MCMBPQ9BTE3 642 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 GPAMQ9HCL2 828 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 CTNNAL1Q9UBT7 734 aa21.39■■□□□ 1.01
PTPN4-207ENST00000460162 GABRR3A8MPY1 467 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 B3GALT4O96024 378 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 SERPINA6P08185 405 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 GNAZP19086 355 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 RPL21P46778 160 aaKnown RBP21.38■■□□□ 1.01
PTPN4-207ENST00000460162 PMP22Q01453 160 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 RBPJQ06330 500 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 HYAL2Q12891 473 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 OR1C1Q15619 314 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 TSNQ15631 228 aaKnown RBP21.38■■□□□ 1.01
PTPN4-207ENST00000460162 KLHDC8AQ8IYD2 350 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 TMEM178AQ8NBL3 297 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 ELP5Q8TE02 316 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 SCMH1Q96GD3 660 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 SIGLEC12Q96PQ1 595 aa21.38■■□□□ 1.01
PTPN4-207ENST00000460162 SUCOQ9UBS9 1254 aaKnown RBP21.38■■□□□ 1.01
PTPN4-207ENST00000460162 CTAGE15A4D2H0 777 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 PSMD12O00232 456 aaPredicted RBP21.37■■□□□ 1.01
PTPN4-207ENST00000460162 PRMT3O60678 531 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 B4GALT2O60909 372 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 DNAJB6O75190 326 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 MLYCDO95822 493 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 SMIM10L1P0DMW3 83 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 RNH1P13489 461 aaKnown RBP21.37■■□□□ 1.01
PTPN4-207ENST00000460162 CD46P15529 392 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 GSTM2P28161 218 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 SLC6A12P48065 614 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 RAB8AP61006 207 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 RBBP5Q15291 538 aaKnown RBP21.37■■□□□ 1.01
PTPN4-207ENST00000460162 CTAGE6Q86UF2 777 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 CEP97Q8IW35 865 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 HORMAD2Q8N7B1 307 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 TTLQ8NG68 377 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 CREB3L4Q8TEY5 395 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 ANKRD49Q8WVL7 239 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 SMIM10Q96HG1 83 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 PTCHD1Q96NR3 888 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms