RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 NSL1Q96IY1 281 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 LMF2Q9BU23 707 aaKnown RBP3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 TEX12Q9BXU0 123 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 DNAI2Q9GZS0 605 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 WDR13Q9H1Z4 485 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 S1PR5Q9H228 398 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 MMP27Q9H306 513 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 VCPKMTQ9H867 229 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 FGF22Q9HCT0 170 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 PDE7BQ9NP56 450 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 ANKEF1Q9NU02 776 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 NSMCE4AQ9NXX6 385 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 HOXC10Q9NYD6 342 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 VPS54Q9P1Q0 977 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 DDX25Q9UHL0 483 aaKnown RBP3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 MAN1B1Q9UKM7 699 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 EXOC7Q9UPT5 735 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 GRIP1Q9Y3R0 1128 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 EP400Q96L91 3159 aa3.26□□□□□ -1.89
SSX2IP-204ENST00000459708 MYH4Q9Y623 1939 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 PPIP5K2O43314 1243 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CDC123O75794 336 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 FLOT1O75955 427 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 PIGNO95427 931 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 EML2O95834 649 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 SLC25A27O95847 323 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 POLR2MP0CAP2 368 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ZNF26P17031 533 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GJA1P17302 382 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CAPN2P17655 700 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 EFNA1P20827 205 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 SAT1P21673 171 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 DNASE1P24855 282 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 MARCKSP29966 332 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 NKX2-1P43699 371 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 VEGFCP49767 419 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CDH13P55290 713 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 DYNLL1P63167 89 aaKnown RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GABPB1Q06547 395 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 STK4Q13043 487 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ITGA9Q13797 1035 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 SPA17Q15506 151 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ZCWPW2Q504Y3 356 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CEP55Q53EZ4 464 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 PWWP2BQ6NUJ5 590 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 BHLHB9Q6PI77 547 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 C11orf57Q6ZUT1 292 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 OTUD6AQ7L8S5 288 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CHST3Q7LGC8 479 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 TMEM173Q86WV6 379 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ZNF677Q86XU0 584 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 C4orf19Q8IY42 314 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 EFCAB13Q8IY85 973 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ZNF595Q8IYB9 648 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CFAP206Q8IYR0 622 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GPC2Q8N158 579 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ARHGAP24Q8N264 748 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 TC2NQ8N9U0 490 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 DDHD1Q8NEL9 900 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ANKRD7Q92527 254 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 KIFAP3Q92845 792 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ATP6V0A1Q93050 837 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 DHX58Q96C10 678 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GIMAP5Q96F15 307 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ABHD1Q96SE0 405 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 BTBD10Q9BSF8 475 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 TUBGCP2Q9BSJ2 902 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 PARVGQ9HBI0 331 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 MED4Q9NPJ6 270 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 GIMAP4Q9NUV9 329 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 AIPL1Q9NZN9 384 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 MRPL15Q9P015 296 aaKnown RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 IFNKQ9P0W0 207 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CHORDC1Q9UHD1 332 aaPredicted RBP3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 TMEM5Q9Y2B1 443 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 SLX4Q8IY92 1834 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 CNTNAP1P78357 1384 aa3.25□□□□□ -1.89
SSX2IP-204ENST00000459708 ZNF541Q9H0D2 1346 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 COL4A1P02462 1669 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 IGHV4-4A0A075B6R2 117 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 UQCRHLA0A096LP55 91 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 A0A1B0GU03 582 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 A0A1W2PN81 502 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 MEIOCA2RUB1 952 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 GLOD5A6NK44 160 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 MIF4GDA9UHW6 222 aaKnown RBP3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 CCDC188H7C350 402 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 CXCL11O14625 94 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 MEIS2O14770 477 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 KLRC4O43908 158 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 TBCAO75347 108 aaKnown RBP3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 BEST1O76090 585 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 GGPS1O95749 300 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 UQCRHP07919 91 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 HMBSP08397 361 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 OR2T7P0C7T2 308 aa3.24□□□□□ -1.89
SSX2IP-204ENST00000459708 EPB41P11171 864 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms