RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 Q8N9G6 341 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 OR7G3Q8NG95 312 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 STARD8Q92502 1023 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 NEIL2Q969S2 332 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PKP4Q99569 1192 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 CHCHD6Q9BRQ6 235 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PCDHGA2Q9Y5H1 932 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 CLDN24A6NM45 220 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 AGRPO00253 132 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SSX4O60224 188 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF8P17098 575 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 GGT2P36268 569 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 VEZF1Q14119 521 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF404Q494X3 552 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 LIPJQ5W064 366 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ARMC8Q8IUR7 673 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 DNAJC22Q8N4W6 341 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 POC5Q8NA72 575 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 WDR48Q8TAF3 677 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF675Q8TD23 568 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 OR5M11Q96RB7 305 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 EPYCQ99645 322 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SORBS1Q9BX66 1292 aaKnown RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 GABARAPL3Q9BY60 117 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CPNE5Q9HCH3 593 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ADPRHL2Q9NX46 363 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 LSM7Q9UK45 103 aaKnown RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 PCDHGB3Q9Y5G1 929 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 MGAT4DA6NG13 374 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 LEFTY2O00292 366 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 TEX28O15482 410 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 HOXA2O43364 376 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 TGFB1P01137 390 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 IMPA1P29218 277 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CTSKP43235 329 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 MAPK8P45983 427 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SELENOWP63302 87 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CSTF3Q12996 717 aaKnown RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 FADDQ13158 208 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 KCNJ8Q15842 424 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CDKL4Q5MAI5 379 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF362Q5T0B9 420 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 MSANTD1Q6ZTZ1 278 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 TMPRSS11BQ86T26 416 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 FAM9CQ8IZT9 166 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 LGI4Q8N135 537 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 C2orf73Q8N5S3 287 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-203ENST00000458591 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 SP140LQ9H930 580 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 ATP11BQ9Y2G3 1177 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 C5orf42Q9H799 3197 aa13.59□□□□□ -0.23
SCFD1-203ENST00000458591 PRAMEF33A0A0G2JMD5 474 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ISPDA4D126 451 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 NEDD8-MDP1E9PL57 170 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 NPIPB8E9PQR5 432 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 PRAMEF10O60809 474 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 UPK1BO75841 260 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 LATS1O95835 1130 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CDK1P06493 297 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 IGFBP1P08833 259 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ADORA3P0DMS8 318 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ST3GAL4Q11206 333 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 TPGS2Q68CL5 300 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 KLHL17Q6TDP4 642 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 LACC1Q8IV20 430 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 SLC7A5P1Q8MH63 180 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CPA6Q8N4T0 437 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 RASGEF1AQ8N9B8 481 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 IPCEF1Q8WWN9 437 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CCM2Q9BSQ5 444 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ITM2BQ9Y287 266 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 PPIL1Q9Y3C6 166 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 AGAP5A6NIR3 686 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CLCA1A8K7I4 914 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 KLHL18O94889 574 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 DLGAP3O95886 979 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CDC20Q12834 499 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 RAB33AQ14088 237 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ARMCX4Q5H9R4 360 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 ARMCX6Q7L4S7 300 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 SLC46A3Q7Z3Q1 461 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 WDR53Q7Z5U6 358 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms