RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ANAPC1Q9H1A4 1944 aa18.83■□□□□ 0.6
CNEP1R1-203ENST00000458059 CLDN24A6NM45 220 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CLCA1A8K7I4 914 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 TSPAN6O43657 245 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CKMT1AP12532 417 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 PDHA2P29803 388 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CTSCP53634 463 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 ATN1P54259 1190 aaPredicted RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 UBE2UQ5VVX9 321 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CYP4Z2PQ8N1L4 340 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 ELMOD1Q8N336 334 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 METTL4Q8N3J2 472 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 C11orf65Q8NCR3 313 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 ATL1Q8WXF7 558 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 SORBS1Q9BX66 1292 aaKnown RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 PNMA8CA0A1B0GUJ8 204 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 KPNA5O15131 536 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CDK1P06493 297 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 HLA-FP30511 346 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 GGT2P36268 569 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 CCBE1Q6UXH8 406 aaPredicted RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 HSD11B1LQ7Z5J1 315 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 BCDIN3DQ7Z5W3 292 aaKnown RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 HMGN2P46Q86SG4 172 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 GALNT13Q8IUC8 556 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 B3GNT7Q8NFL0 401 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 VANGL1Q8TAA9 524 aaPredicted RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 EHD1Q9H4M9 534 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 FAM120CQ9NX05 1096 aaKnown RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 ABT1Q9ULW3 272 aaKnown RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 RUVBL1Q9Y265 456 aaKnown RBP18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 A0A0C4DFX4 3053 aa18.82■□□□□ 0.6
CNEP1R1-203ENST00000458059 RPLP0P05388 317 aaKnown RBP18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SPINT3P49223 89 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SNRPD1P62314 119 aaKnown RBP18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 STARD3Q14849 445 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 RNF130Q86XS8 419 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 AMER2Q8N7J2 671 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 STARD8Q92502 1023 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 MYDGFQ969H8 173 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 PKP4Q99569 1192 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SLC35A5Q9BS91 424 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SH2B3Q9UQQ2 575 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 CBSLP0DN79 551 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 CBSP35520 551 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 COL9A2Q14055 689 aaPredicted RBP18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 GGTA1PQ4G0N0 100 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 FAM9CQ8IZT9 166 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 OR8H2Q8N162 312 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 PITX2Q99697 317 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 KIAA0513O60268 411 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 NUAK1O60285 661 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SOCS5O75159 536 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 IDSP22304 550 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 CSNK1DP48730 415 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 ZNF783Q6ZMS7 281 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 SLC46A3Q7Z3Q1 461 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 C11orf74Q86VG3 221 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 GATAD2AQ86YP4 633 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 VPS37AQ8NEZ2 397 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 OR7G3Q8NG95 312 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 OR8J2Q8NGG1 315 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 WDR20Q8TBZ3 569 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 NRTNQ99748 197 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 MMP27Q9H306 513 aa18.81■□□□□ 0.6
CNEP1R1-203ENST00000458059 PRAMEF33A0A0G2JMD5 474 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 A0A1W2PRU2 124 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 AP3D1O14617 1153 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 CA12O43570 354 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 PRAMEF10O60809 474 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 HNMTP50135 292 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 COPZ1P61923 177 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 C22orf39Q6P5X5 142 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 USP43Q70EL4 1123 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 CHCHD4Q8N4Q1 142 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 WDR36Q8NI36 951 aaKnown RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 NEIL2Q969S2 332 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 IGSF21Q96ID5 467 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 SIGLEC11Q96RL6 698 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 FAM129BQ96TA1 746 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 RIOK2Q9BVS4 552 aaKnown RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 SCN8AQ9UQD0 1980 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 ASNA1O43681 348 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 CHI3L1P36222 383 aaPredicted RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 RGS6P49758 472 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 SELENOWP63302 87 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 DAB2P98082 770 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 SCARB2Q14108 478 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 RPS26P11Q5JNZ5 115 aaPredicted RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 C10orf62Q5T681 223 aaPredicted RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 VOPP1Q96AW1 172 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 ACAT2Q9BWD1 397 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 NUAK2Q9H093 628 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 EHD3Q9NZN3 535 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 LSM7Q9UK45 103 aaKnown RBP18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 IFT52Q9Y366 437 aa18.8■□□□□ 0.6
CNEP1R1-203ENST00000458059 SCN5AQ14524 2016 aa18.79■□□□□ 0.6
CNEP1R1-203ENST00000458059 WWP2O00308 870 aa18.79■□□□□ 0.6
CNEP1R1-203ENST00000458059 SOX3P41225 446 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms