RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 HAO1Q9UJM8 370 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 PTGDR2Q9Y5Y4 395 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 AK5Q9Y6K8 562 aa13.46□□□□□ -0.25
LINC00887-204ENST00000456816 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.26
LINC00887-204ENST00000456816 DMXL1Q9Y485 3027 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 COL27A1Q8IZC6 1860 aaPredicted RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 A0A088AWK7 358 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 A0A0G2JN53 185 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 TRPC5OSA6NMA1 111 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 EDF1O60869 148 aaKnown RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 CPNE3O75131 537 aaKnown RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 KIAA0754O94854 1291 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 NTRK1P04629 796 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 HBQ1P09105 142 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 ZNF10P21506 573 aaPredicted RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 SSR2P43308 183 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 HK2P52789 917 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 SKP1P63208 163 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 HMGCS1Q01581 520 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 BTKQ06187 659 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 HERC3Q15034 1050 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 NR6A1Q15406 480 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 C1orf189Q5VU69 101 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 YOD1Q5VVQ6 348 aaPredicted RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 GARNL3Q5VVW2 1013 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 SRFBP1Q8NEF9 429 aaKnown RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 GAL3ST3Q96A11 431 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 RGMAQ96B86 450 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 C19orf60Q96EN9 201 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 CCT7Q99832 543 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 NUF2Q9BZD4 464 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 ACPTQ9BZG2 426 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 KLHL31Q9H511 634 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 CCDC134Q9H6E4 229 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 FGFR1OP2Q9NVK5 253 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 VPS29Q9UBQ0 182 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
LINC00887-204ENST00000456816 CNOT1A5YKK6 2376 aaKnown RBP13.45□□□□□ -0.26
LINC00887-204ENST00000456816 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 FITM1A5D6W6 292 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 HDAC3O15379 428 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 TIAF1O95411 115 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 ALOX12P18054 663 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 IL1RNP18510 177 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 SPINK2P20155 84 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 AVPR1BP47901 424 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 BTN3A2P78410 334 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 ACSM2AQ08AH3 577 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 CUL3Q13618 768 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 AP5B1Q2VPB7 878 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 UGT3A2Q3SY77 523 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 GALNTL6Q49A17 601 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 DEFB134Q4QY38 66 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 DEPDC1Q5TB30 811 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 ACSM2BQ68CK6 577 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 TMEM214Q6NUQ4 689 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 METTL27Q8N6F8 245 aaPredicted RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 PMEPA1Q969W9 287 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 TUBGCP3Q96CW5 907 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 NXPE2Q96DL1 559 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 MS4A6EQ96DS6 147 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 CHMP6Q96FZ7 201 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 KCNC2Q96PR1 638 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 MRPL1Q9BYD6 325 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 ROGDIQ9GZN7 287 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 NSRP1Q9H0G5 558 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 NPHS2Q9NP85 383 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 DHCR7Q9UBM7 475 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 MRPS2Q9Y399 296 aaKnown RBP13.44□□□□□ -0.26
LINC00887-204ENST00000456816 PCDHB3Q9Y5E6 796 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 PCDHGA8Q9Y5G5 932 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 USH1CQ9Y6N9 552 aa13.44□□□□□ -0.26
LINC00887-204ENST00000456816 A0A0A6YYC8 382 aaPredicted RBP13.43□□□□□ -0.26
LINC00887-204ENST00000456816 A0A1B0GX78 115 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 ARHGAP10A1A4S6 786 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 I3L1I5 382 aaPredicted RBP13.43□□□□□ -0.26
LINC00887-204ENST00000456816 DSCR3O14972 297 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 DIAPH2O60879 1101 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 SEC22BO75396 215 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 RSL1D1O76021 490 aaKnown RBP13.43□□□□□ -0.26
LINC00887-204ENST00000456816 STK17BO94768 372 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 MYO1DO94832 1006 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 KLHL18O94889 574 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 SEMA3DO95025 777 aa13.43□□□□□ -0.26
LINC00887-204ENST00000456816 ETHE1O95571 254 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms