RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OSER1Q9NX31 292 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ELOVL2Q9NXB9 296 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TRPM7Q96QT4 1865 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 LRRC37A2A6NM11 1700 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SYCE1LA8MT33 242 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PTP4A3O75365 173 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NCR1O76036 304 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 USP17L7P0C7H9 530 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TGFB3P10600 412 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ITGB7P26010 798 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GRIK1P39086 918 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 STAT5BP51692 787 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FGL2Q14314 439 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR19Q15760 415 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 UGP2Q16851 508 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PRSS53Q2L4Q9 553 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CRB2Q5IJ48 1285 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PDSS1Q5T2R2 415 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NBPF12Q5TAG4 269 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF598Q86UK7 904 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SP8Q8IXZ3 490 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PIAS4Q8N2W9 510 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 OR6M1Q8NGM8 313 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 OR52P1PQ8NH57 321 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 THAP4Q8WY91 577 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SEPT1Q8WYJ6 367 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FOXJ1Q92949 421 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM209Q96SK2 561 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ORAI3Q9BRQ5 295 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM134Q9H6X4 195 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NMUR1Q9HB89 426 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ARNT2Q9HBZ2 717 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MRM3Q9HC36 420 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TRAPPC4Q9Y296 219 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SIRT4Q9Y6E7 314 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PIEZO2Q9H5I5 2752 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 WASHC1A8K0Z3 465 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MYO1GB0I1T2 1018 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HHLA1C9JL84 531 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 DNASE2O00115 360 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CXCR6O00574 342 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TPST2O60704 377 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LRATO95237 230 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC34A2O95436 690 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TBX18O95935 607 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 YES1P07947 543 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ACSM4P0C7M7 580 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KDELR2P33947 212 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 AVPR1BP47901 424 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SUOXP51687 545 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PER3P56645 1201 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KIAA1024LP59773 190 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SEMG2Q02383 582 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RGS1Q08116 209 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GNA13Q14344 377 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TSTQ16762 297 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HFEQ30201 348 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MANEALQ5VSG8 457 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ANKS6Q68DC2 871 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MPZL3Q6UWV2 235 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TFAP2EQ6VUC0 442 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PROSER1Q86XN7 944 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RBM45Q8IUH3 476 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ATG16L2Q8NAA4 619 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KLRG1Q96E93 195 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MSLNLQ96KJ4 702 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CPPED1Q9BRF8 314 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF649Q9BS31 505 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TSEN34Q9BSV6 310 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TTYH1Q9H313 450 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RPAP3Q9H6T3 665 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SPC25Q9HBM1 224 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GLOD4Q9HC38 313 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RBM22Q9NW64 420 aaKnown RBP eCLIP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 STMN3Q9NZ72 180 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RHCGQ9UBD6 479 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A0G2JMZ2 1700 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MOXD2PA6NHM9 499 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CLCA1A8K7I4 914 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF487B1APH4 448 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ENTPD6O75354 484 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SH3BGRLO75368 114 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR32O75388 356 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 NPM3O75607 178 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CDK1P06493 297 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 F8A1P23610 371 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ERP29P30040 261 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SFNP31947 248 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CXCR4P61073 352 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CYP4F8P98187 520 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF45Q02386 682 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF33BQ06732 778 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GAB1Q13480 694 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RFX4Q33E94 735 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PAN2Q504Q3 1202 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 STRIP1Q5VSL9 837 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SLFN12LQ6IEE8 588 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 WASH2PQ6VEQ5 465 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PODNQ7Z5L7 613 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms