RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 H3BMQ9 156 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 BCHEP06276 602 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 TIA1P31483 386 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMPD4-213ENST00000454468 CARTPTQ16568 116 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 TMEM236Q5W0B7 351 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 DSG4Q86SJ6 1040 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 CYP4Z1Q86W10 505 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 MEX3DQ86XN8 651 aaKnown RBP11.51□□□□□ -0.57
SMPD4-213ENST00000454468 KRT78Q8N1N4 520 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF557Q8N988 423 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-213ENST00000454468 TMEM145Q8NBT3 493 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 ARMC5Q96C12 935 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 COG8Q96MW5 612 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 C17orf62Q9BQA9 187 aa11.51□□□□□ -0.57
SMPD4-213ENST00000454468 YY2O15391 372 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 C1orf105O95561 183 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 C1GALT1C1LP0DN25 315 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 CD9P21926 228 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ALDH6A1Q02252 535 aaKnown RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 GAB1Q13480 694 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 NR1D2Q14995 579 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 GCNT6Q5T4J0 391 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ANXA8L1Q5VT79 327 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 OR10G6Q8NH81 332 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 VPS35Q96QK1 796 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 TMED5Q9Y3A6 229 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 CKAP5Q14008 2032 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 SCAMP2O15127 329 aaKnown RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 OR10H3O60404 316 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 MMP12P39900 470 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 IL12RB1P42701 662 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 CTSKP43235 329 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 TUBA4AP68366 448 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF763Q0D2J5 394 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF773Q6PK81 442 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ERN2Q76MJ5 926 aaKnown RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 SLCO6A1Q86UG4 719 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ABHD8Q96I13 439 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 LYSMD1Q96S90 227 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 FEVQ99581 238 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 EPB41L1Q9H4G0 881 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 GORASP2Q9H8Y8 452 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 C11orf16Q9NQ32 467 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 PCDHB11Q9Y5F2 797 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 ASCC3Q8N3C0 2202 aaKnown RBP11.5□□□□□ -0.57
SMPD4-213ENST00000454468 SEC16AO15027 2179 aa11.5□□□□□ -0.57
SMPD4-213ENST00000454468 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 FAM227AF5H4B4 570 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SLC28A2O43868 658 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 KCNK5O95279 499 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 BMP10O95393 424 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 HLCSP50747 726 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CCR3P51677 355 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 LBX1P52954 281 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PNLIPRP1P54315 467 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PTPN5P54829 565 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 HPCAP84074 193 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SP140Q13342 867 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF77Q15935 545 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CTU2Q2VPK5 515 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TRIM40Q6P9F5 258 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CEACAM20Q6UY09 585 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PROX1Q92786 737 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 DTD2Q96FN9 168 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 LGR4Q9BXB1 951 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ABCG4Q9H172 646 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SERHLQ9NQF3 203 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PRAMEF33A0A0G2JMD5 474 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 GFYI3L273 518 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SLC1A7O00341 560 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PPM1DO15297 605 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 NDUFS2O75306 463 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PRKRAO75569 313 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 NR2F1P10589 423 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TNNI3P19429 210 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 BUD31P41223 144 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SLC6A12P48065 614 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 DAB2P98082 770 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CDK6Q00534 326 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ELAVL3Q14576 367 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 FAM83HQ6ZRV2 1179 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF614Q8N883 585 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 VWCEQ96DN2 955 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RAD18Q9NS91 495 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms