RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRDM8Q9NQV8 689 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 EXD2Q9NVH0 621 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 VNN3Q9NY84 501 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 ZNF639Q9UID6 485 aa11.29□□□□□ -0.6
VTA1-203ENST00000452973 SAMD4AQ9UPU9 718 aaKnown RBP11.29□□□□□ -0.6
VTA1-203ENST00000452973 SMIM31A0A1B0GVY4 71 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 COL9A1P20849 921 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PTX3P26022 381 aaPredicted RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 DCTP40126 519 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 RGNQ15493 299 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 PRSS53Q2L4Q9 553 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 CYP27C1Q4G0S4 372 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 LCTLQ6UWM7 567 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PATL1Q86TB9 770 aaKnown RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 IL17RCQ8NAC3 791 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 DGCR14Q96DF8 476 aaKnown RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 HSH2DQ96JZ2 352 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 SLC35A5Q9BS91 424 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 TRIM4Q9C037 500 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 H0Y8X5 98 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 VILLO15195 856 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PRSS23O95084 383 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 FURINP09958 794 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 TNFRSF1BP20333 461 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 CHI3L1P36222 383 aaPredicted RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 PLA2G16P53816 162 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PPP2CBP62714 309 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PPP2CAP67775 309 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 VLDLRP98155 873 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 CLCA4Q14CN2 919 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 RAB30Q15771 203 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 GALNT18Q6P9A2 607 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 FAM129CQ86XR2 697 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 UBE2E3Q969T4 207 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 COQ8BQ96D53 544 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 EHD1Q9H4M9 534 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 ATAD3AQ9NVI7 634 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PLPP1O14494 284 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PPM1DO15297 605 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 MITFO75030 526 aaPredicted RBP11.28□□□□□ -0.6
VTA1-203ENST00000452973 CYP4B1P13584 511 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 TRIM23P36406 574 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 PIGAP37287 484 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 MPEG1Q2M385 716 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 METTL4Q8N3J2 472 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 SMPDL3AQ92484 453 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 KLHL20Q9Y2M5 609 aa11.28□□□□□ -0.6
VTA1-203ENST00000452973 POM121BA6NF01 834 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 ADAM23O75077 832 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 KLHL18O94889 574 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 CEACAM5P06731 702 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 SHMT2P34897 504 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 IGFALSP35858 605 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 PRIM2P49643 509 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 CCR8P51685 355 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 MAPK12P53778 367 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 ADPRHP54922 357 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 ADARB1P78563 741 aaKnown RBP11.27□□□□□ -0.6
VTA1-203ENST00000452973 E2F2Q14209 437 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 SLC30A9Q6PML9 568 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 KIAA1324Q6UXG2 1013 aaKnown RBP11.27□□□□□ -0.6
VTA1-203ENST00000452973 SLC9B2Q86UD5 537 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 SLC44A2Q8IWA5 706 aaPredicted RBP11.27□□□□□ -0.6
VTA1-203ENST00000452973 ZC3H7AQ8IWR0 971 aaKnown RBP11.27□□□□□ -0.6
VTA1-203ENST00000452973 FLCNQ8NFG4 579 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 METTL2AQ96IZ6 378 aaKnown RBP11.27□□□□□ -0.6
VTA1-203ENST00000452973 S1PR5Q9H228 398 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 C8orf4Q9NR00 106 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.6
VTA1-203ENST00000452973 MYO10Q9HD67 2058 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 A0A1W2PRB8 838 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 C1orf226A1L170 272 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 SH3BP5O60239 455 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.61
VTA1-203ENST00000452973 CD72P21854 359 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
VTA1-203ENST00000452973 PIK3CBP42338 1070 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 KCNAB2Q13303 367 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 ADAM15Q13444 863 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 ENPP2Q13822 863 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 CPZQ66K79 652 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 TMEM184AQ6ZMB5 413 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 CEP68Q76N32 757 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 SZRD1Q7Z422 152 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 HORMAD1Q86X24 394 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 RNF130Q86XS8 419 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 OXR1Q8N573 874 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 SPPL2AQ8TCT8 520 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 SIPA1Q96FS4 1042 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 RIPOR3Q96MK2 946 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms