RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 NSG1A0A0A6YYJ2 146 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 TTLL8A6PVC2 850 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 POC1B-GALNT4F8VUJ3 575 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PCDH17O14917 1159 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 CHST10O43529 356 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 CCNT2O60583 730 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 KLHL2O95198 593 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 INHBAP08476 426 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 MTHFD2P13995 350 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 GLRBP48167 497 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 SERPINB8P50452 374 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 RAB8AP61006 207 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 OLR1P78380 273 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 FOXK1P85037 733 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 KCNC4Q03721 635 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 DOC2AQ14183 400 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 ACAP2Q15057 778 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PDK4Q16654 411 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 FAM83EQ2M2I3 478 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PLEKHN1Q494U1 663 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 MINDY4Q4G0A6 757 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 XKR6Q5GH73 641 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 MFSD4BQ5TF39 518 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 AGAP7PQ5VUJ5 663 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 SLC6A19Q695T7 634 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 ABHD13Q7L211 337 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PLD6Q8N2A8 252 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 METTL21AQ8WXB1 218 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 WDR34Q96EX3 536 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 AGAP4Q96P64 663 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PAFAH2Q99487 392 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 LHPPQ9H008 270 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 EHD1Q9H4M9 534 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 NT5DC2Q9H857 520 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 LANCL2Q9NS86 450 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 LUZP4Q9P127 313 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF490Q9ULM2 529 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 PLAAQ9Y263 795 aa12.03□□□□□ -0.48
PRPF40A-203ENST00000448428 SPTA1P02549 2419 aa12.02□□□□□ -0.48
PRPF40A-203ENST00000448428 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 LRIT2A6NDA9 550 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 URADA6NGE7 173 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 C4orf51C9J302 202 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 SORBS2O94875 1100 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 FAM153BP0C7A2 387 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 C8orf89P0DMQ9 161 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 CD22P20273 847 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 IL10P22301 178 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 MSH2P43246 934 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 CHIT1Q13231 466 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PCOLCEQ15113 449 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 FAM153CQ494X1 144 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 TOR1AIP1Q5JTV8 583 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 IRAK1BP1Q5VVH5 260 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 ADNP2Q6IQ32 1131 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 NIPAL1Q6NVV3 410 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 LANCL3Q6ZV70 420 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 LRRC70Q7Z2Q7 622 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 VN1R5Q7Z5H4 357 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 CPEB2Q7Z5Q1 589 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 KBTBD2Q8IY47 623 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 Q8NA96 180 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PLPP5Q8NEB5 264 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 DCAKDQ8WVC6 231 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PSMF1Q92530 271 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PNPLA2Q96AD5 504 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PTCD3Q96EY7 689 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 IMMP1LQ96LU5 166 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 PITHD1Q9GZP4 211 aaPredicted RBP12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 VPS11Q9H270 941 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.49
PRPF40A-203ENST00000448428 IGHV3-20A0A0C4DH32 117 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 ANKDD1BA6NHY2 528 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 SYCE1LA8MT33 242 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CLEC3AO75596 197 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CDC123O75794 336 aaPredicted RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 WFS1O76024 890 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 FHP07954 510 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CELA2AP08217 269 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CYC1P08574 325 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 PRR35P0CG20 571 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 HNRNPH1P31943 449 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CASP2P42575 452 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 MAGEA12P43365 314 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 SERPINB9P50453 376 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 STXBP1P61764 594 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 SKP1P63208 163 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 RHAGQ02094 409 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 IRF8Q02556 426 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 LAPTM5Q13571 262 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 TBCCQ15814 346 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 PFKFB4Q16877 469 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 KLC3Q6P597 504 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms