RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 PCTPQ9UKL6 214 aa12.67□□□□□ -0.38
SNHG4-201ENST00000448190 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
SNHG4-201ENST00000448190 MAN2B2Q9Y2E5 1009 aa12.67□□□□□ -0.38
SNHG4-201ENST00000448190 PADI2Q9Y2J8 665 aa12.67□□□□□ -0.38
SNHG4-201ENST00000448190 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 A0A1B0GTL3 188 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 LRIT2A6NDA9 550 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 A6NL46 340 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SAP18O00422 153 aaKnown RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 STX16O14662 325 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 GALR3O60755 368 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 GLRA3O75311 464 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 DNAJB5O75953 348 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SUPT7LO94864 414 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 NSA2O95478 260 aaKnown RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 TBX6O95947 436 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 TGFB1P01137 390 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ALBP02768 609 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 PROCP04070 461 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SERPINA6P08185 405 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ATP5F1P24539 256 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 CCL11P51671 97 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 NEK2P51955 445 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 CCNG1P51959 295 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 RHDQ02161 417 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SLC18A2Q05940 514 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ZNF844Q08AG5 666 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ATP1A4Q13733 1029 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SSPNQ14714 243 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 HERC3Q15034 1050 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SGO1Q5FBB7 561 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 CPZQ66K79 652 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SRRM1Q8IYB3 904 aaKnown RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 IQCKQ8N0W5 287 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 AFAP1L2Q8N4X5 818 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 CCNYL1Q8N7R7 359 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 OR7G3Q8NG95 312 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 PPP4R1Q8TF05 950 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 FKBP10Q96AY3 582 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SPSB2Q99619 263 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SLC26A1Q9H2B4 701 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 LGALS13Q9UHV8 139 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 C3orf18Q9UK00 162 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 POLHQ9Y253 713 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 SLC22A7Q9Y694 548 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 PTPRQQ9UMZ3 2332 aa12.66□□□□□ -0.38
SNHG4-201ENST00000448190 FAM227AF5H4B4 570 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 G3V2L1 256 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CHST10O43529 356 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 PLIN3O60664 434 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ALOX12BO75342 701 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CLEC3AO75596 197 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CDC123O75794 336 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CLDN9O95484 217 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 HEXBP07686 556 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CD63P08962 238 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 SMIM10L1P0DMW3 83 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MYL2P10916 166 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CCR10P46092 362 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 XCR1P46094 333 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 PRKAA2P54646 552 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 EMP2P54851 167 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ZRSR2Q15696 482 aaKnown RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ZNF678Q5SXM1 525 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MFSD4BQ5TF39 518 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 LIPJQ5W064 366 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ABHD13Q7L211 337 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 PPP1R32Q7Z5V6 425 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MILR1Q7Z6M3 343 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 TRABD2AQ86V40 505 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 LCA5Q86VQ0 697 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 TTLQ8NG68 377 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 C8orf44Q96CB5 159 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MS4A6EQ96DS6 147 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MVB12AQ96EY5 273 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 PEX11GQ96HA9 241 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 SMIM10Q96HG1 83 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CATSPER2Q96P56 530 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 TMEM237Q96Q45 408 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 TRIM55Q9BYV6 548 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 OR51B5Q9H339 312 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 WDR54Q9H977 334 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms