RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 DISP2A7MBM2 1401 aa8.37□□□□□ -1.07
MCF2L2-203ENST00000447025 URADA6NGE7 173 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 RFPL3O75679 317 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PPBPP02775 128 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 RAF1P04049 648 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TPOP07202 933 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 CYP7A1P22680 504 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 EPHA8P29322 1005 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 CCR6P51684 374 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TNFRSF17Q02223 184 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 HLFQ16534 295 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ARMC12Q5T9G4 340 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 KDM4DQ6B0I6 523 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 CYHR1Q6ZMK1 362 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 GPR137CQ8N3F9 429 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TMEM104Q8NE00 496 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 GPRC5AQ8NFJ5 357 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 IL31RAQ8NI17 732 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SETD6Q8TBK2 473 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 C16orf78Q8WTQ4 265 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FKBP10Q96AY3 582 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MGME1Q9BQP7 344 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 DPH7Q9BTV6 452 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TMEM208Q9BTX3 173 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 HTATIP2Q9BUP3 242 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 NLNQ9BYT8 704 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 NANSQ9NR45 359 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FBXO6Q9NRD1 293 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TBC1D13Q9NVG8 400 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PAK1IP1Q9NWT1 392 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 OR12D3Q9UGF7 316 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SCP2D1Q9UJQ7 156 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 C3orf18Q9UK00 162 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FEM1BQ9UK73 627 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 BTBD3Q9Y2F9 522 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 UTRNP46939 3433 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MYH3P11055 1940 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PEAK1Q9H792 1746 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 USP17L3A6NCW0 530 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM86C2PA6NEL3 165 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 LRRN3E7EW58 273 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 I6L893 689 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PPP6CO00743 305 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PNPP00491 289 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MPOP05164 745 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 CKMP06732 381 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 CA4P22748 312 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ME2P23368 584 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MYF6P23409 242 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 HLA-DMAP28067 261 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FMO5P49326 533 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 AP3S2P59780 193 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 GPC5P78333 572 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 LSM11P83369 360 aaKnown RBP eCLIP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SF1Q15637 639 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SNAPC1Q16533 368 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MTFR2Q6P444 385 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 USP17L2Q6R6M4 530 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SYVN1Q86TM6 617 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ISCA2Q86U28 154 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SCN4BQ8IWT1 228 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ZNF679Q8IYX0 411 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 YIPF7Q8N8F6 280 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ZNF557Q8N988 423 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM47BQ8NA70 645 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ZMIZ2Q8NF64 920 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 OR56A3Q8NH54 315 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 MED8Q96G25 268 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 RPL10LQ96L21 214 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 ADAM2Q99965 735 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 HSD17B14Q9BPX1 270 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SDCBP2Q9H190 292 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TMPRSS5Q9H3S3 457 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 LRRN3Q9H3W5 708 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 TLR8Q9NR97 1041 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 PRMT7Q9NVM4 692 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 SLC6A5Q9Y345 797 aa8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 COL3A1P02461 1466 aaPredicted RBP8.36□□□□□ -1.07
MCF2L2-203ENST00000447025 RNF103-CHMP3A0A140T963 221 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 MYMKA6NI61 221 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 H0Y8G0 127 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 SOCS6O14544 535 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 GABRDO14764 452 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 OIP5O43482 229 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 OR10H3O60404 316 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 HPGDSO60760 199 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 NDUFS3O75489 264 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 GCP02774 474 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 GIMD1P0DJR0 217 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 ARSBP15848 533 aa8.35□□□□□ -1.07
MCF2L2-203ENST00000447025 ERCC2P18074 760 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms