RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MIR1-1HGQ9H1L0 117 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 SLC6A15Q9H2J7 730 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 SPNS1Q9H2V7 528 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 POLMQ9NP87 494 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ING3Q9NXR8 418 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 BFARQ9NZS9 450 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 NUFIP1Q9UHK0 495 aaKnown RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 RNF6Q9Y252 685 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 A0A1W2PP18 115 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 TUBAL3A6NHL2 446 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ADAM11O75078 769 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 RHOCP08134 193 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ACVRL1P37023 503 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 NPY2RP49146 381 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 EMX2Q04743 252 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ZNF177Q13360 481 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 TBCEQ15813 527 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 RNF219Q5W0B1 726 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 CENPLQ8N0S6 344 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 NPWQ8N729 165 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ZNF366Q8N895 744 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 YIPF7Q8N8F6 280 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 HTR3CQ8WXA8 447 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 GPR137Q96N19 417 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 CCDC115Q96NT0 180 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 FCRL3Q96P31 734 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 WDFY2Q96P53 400 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 NEDD4LQ96PU5 975 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 HHIPQ96QV1 700 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 CAB39LQ9H9S4 337 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 ZBTB20Q9HC78 741 aaPredicted RBP12.61□□□□□ -0.39
DDX56-206ENST00000446987 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 PTTG3PQ9NZH4 202 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 STON1Q9Y6Q2 735 aa12.61□□□□□ -0.39
DDX56-206ENST00000446987 I3L521 148 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 LAMTOR5O43504 91 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 VPS4BO75351 444 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 EEDO75530 441 aaKnown RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 CD160O95971 181 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 ANXA6P08133 673 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 HLA-EP13747 358 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 TNNI3P19429 210 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 MYL9P24844 172 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 OR1E1P30953 314 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 NTSR1P30989 418 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 KRT20P35900 424 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 CXCL12P48061 93 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 TPI1P60174 286 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 SCN1BQ07699 218 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 TYW3Q6IPR3 259 aaKnown RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 DBX2Q6ZNG2 339 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 SLC46A3Q7Z3Q1 461 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 HIPK1Q86Z02 1210 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 SLC22A9Q8IVM8 553 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 ARHGAP12Q8IWW6 846 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 TP53INP2Q8IXH6 220 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 GLB1L3Q8NCI6 653 aaPredicted RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 VANGL1Q8TAA9 524 aaPredicted RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 UFD1Q92890 307 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 ZNF669Q96BR6 464 aaPredicted RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 REPS1Q96D71 796 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 CSPG4P5Q96PW8 444 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 SPATA9Q9BWV2 254 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 GABARAPL1Q9H0R8 117 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 MTG2Q9H4K7 406 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 RNF121Q9H920 327 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 FBXO4Q9UKT5 387 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 PNMA8BQ9ULN7 279 aaPredicted RBP12.6□□□□□ -0.39
DDX56-206ENST00000446987 KLK4Q9Y5K2 254 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 ACTL7AQ9Y615 435 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 FKBP7Q9Y680 259 aa12.6□□□□□ -0.39
DDX56-206ENST00000446987 DCLK1O15075 740 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 XPNPEP2O43895 674 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 FZD6O60353 706 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 AHSGP02765 367 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 SP9P0CG40 484 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 CRADDP78560 199 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ARF5P84085 180 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 IL5RAQ01344 420 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 CLLU1Q5K131 121 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 AFMIDQ63HM1 303 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 RBFAQ8N0V3 343 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 DCAF4L2Q8NA75 395 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 OR7G3Q8NG95 312 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 KCTD4Q8WVF5 259 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms