RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 NSL1Q96IY1 281 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 ST6GAL2Q96JF0 529 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 ZNF583Q96ND8 569 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 GUCD1Q96NT3 240 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 BTBD9Q96Q07 612 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 TRMT61BQ9BVS5 477 aaKnown RBP4.26□□□□□ -1.73
LINC00440-201ENST00000446579 NACAP1Q9BZK3 213 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 TFB2MQ9H5Q4 396 aaKnown RBP4.26□□□□□ -1.73
LINC00440-201ENST00000446579 ZCCHC3Q9NUD5 404 aaKnown RBP4.26□□□□□ -1.73
LINC00440-201ENST00000446579 SLC12A6Q9UHW9 1150 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 TMED7Q9Y3B3 224 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 RIPK3Q9Y572 518 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 PCDHGB1Q9Y5G3 927 aa4.26□□□□□ -1.73
LINC00440-201ENST00000446579 UBE4BO95155 1302 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 FAM205AQ6ZU69 1335 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 MACROD2A1Z1Q3 448 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 MTMR11A4FU01 709 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SERINC4A6NH21 518 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 H3BMM5 538 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 K7EPI3 171 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SLC22A2O15244 555 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 PSMD3O43242 534 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 HSF2BPO75031 334 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 GLRA3O75311 464 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 CLN5O75503 358 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 GRAP2O75791 330 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 MT-ATP6P00846 226 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 PDGFBP01127 241 aaPredicted RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 TGFAP01135 160 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 NR3C1P04150 777 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 ATP1B1P05026 303 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 LHCGRP22888 699 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 RBMS1P29558 406 aaKnown RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 DCTP40126 519 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 GALK2Q01415 458 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 HERC4Q5GLZ8 1057 aaPredicted RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SLC25A53Q5H9E4 307 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 TECRLQ5HYJ1 363 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 G2E3Q7L622 706 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 RPAINQ86UA6 219 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 STHQ8IWL8 128 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 ZNF540Q8NDQ6 660 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 OR13C3Q8NGS6 347 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SPATA18Q8TC71 538 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 HAS2Q92819 552 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 ULK4Q96C45 1275 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 VPS39Q96JC1 886 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 LMLNQ96KR4 655 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 NSMCE2Q96MF7 247 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SPAG8Q99932 426 aaPredicted RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 LRRC2Q9BYS8 371 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 DDX47Q9H0S4 455 aaKnown RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 DPH5Q9H2P9 285 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
LINC00440-201ENST00000446579 POLE3Q9NRF9 147 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 EXOC1Q9NV70 894 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 OR6C2Q9NZP2 312 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 FBXL4Q9UKA2 621 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 PILRBQ9UKJ0 227 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 GRID1Q9ULK0 1009 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 R4GN57 208 aa4.25□□□□□ -1.73
LINC00440-201ENST00000446579 SYNJ2BP-COX16A0A087WUM0 186 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 IGHV4-61A0A0C4DH41 118 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 DENND3A2RUS2 1198 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 E5RGE8 158 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 SSX5O60225 188 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 STBD1O95210 358 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 GAS8O95995 478 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 GHRP10912 638 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 DARSP14868 501 aaKnown RBP4.24□□□□□ -1.73
LINC00440-201ENST00000446579 CPA3P15088 417 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ZNF18P17022 549 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 DNAJB1P25685 340 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 CCND2P30279 289 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ACAA2P42765 397 aaKnown RBP4.24□□□□□ -1.73
LINC00440-201ENST00000446579 TNFSF10P50591 281 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 PPP1R8Q12972 351 aaKnown RBP4.24□□□□□ -1.73
LINC00440-201ENST00000446579 GPR17Q13304 367 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 DPYSQ14117 519 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 TRADDQ15628 312 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 EXT1Q16394 746 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 STX1AQ16623 288 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ANKDD1AQ495B1 522 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 CCDC40Q4G0X9 1142 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ZNF542PQ5EBM4 170 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 PRAMEF7Q5VXH5 474 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 TAF8Q7Z7C8 310 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 SYVN1Q86TM6 617 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ISCA2Q86U28 154 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 TBC1D21Q8IYX1 336 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 ZNF444Q8N0Y2 327 aaPredicted RBP4.24□□□□□ -1.73
LINC00440-201ENST00000446579 THEM5Q8N1Q8 247 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 MARVELD2Q8N4S9 558 aa4.24□□□□□ -1.73
LINC00440-201ENST00000446579 GBP7Q8N8V2 638 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms