RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 FAM53BQ14153 422 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 XKR7Q5GH72 579 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 C3orf38Q5JPI3 329 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 TOR1AIP1Q5JTV8 583 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 TMEM164Q5U3C3 297 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 FAM219BQ5XKK7 198 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 NIPAL1Q6NVV3 410 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 TRIM40Q6P9F5 258 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 SCIMPQ6UWF3 145 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 ABHD13Q7L211 337 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 KCT2Q8NC54 265 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 RGMAQ96B86 450 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 MS4A6EQ96DS6 147 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 METTL2AQ96IZ6 378 aaKnown RBP12.54□□□□□ -0.4
LINC00299-203ENST00000444688 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 HBEGFQ99075 208 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 MACROD1Q9BQ69 325 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 NUF2Q9BZD4 464 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 ASPSCR1Q9BZE9 553 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 OR51B5Q9H339 312 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 MEAF6Q9HAF1 191 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 APMAPQ9HDC9 416 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 STARD5Q9NSY2 213 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 FGFR1OP2Q9NVK5 253 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 AHSPQ9NZD4 102 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 VPS29Q9UBQ0 182 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 SATB2Q9UPW6 733 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 CCL27Q9Y4X3 112 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 PCDHB3Q9Y5E6 796 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 KNTC1P50748 2209 aa12.54□□□□□ -0.4
LINC00299-203ENST00000444688 A0A088AWK7 358 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 FAM149AA5PLN7 773 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ZNF195O14628 629 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ZNF749O43361 778 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 VPS4BO75351 444 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 SCRG1O75711 98 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 LINC00032P0C843 101 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 SMIM10L1P0DMW3 83 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ALOX12P18054 663 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ETV5P41161 510 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 RAP1GDS1P52306 607 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 SKP1P63208 163 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 HMGCS1Q01581 520 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 HERC3Q15034 1050 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 SPIN4Q56A73 249 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 PWWP2BQ6NUJ5 590 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ABHD17CQ6PCB6 329 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 Q6ZSR9 355 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 TMEM126BQ8IUX1 230 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ZCCHC10Q8TBK6 192 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 UTP15Q8TED0 518 aaKnown RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 STON2Q8WXE9 905 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 MVB12AQ96EY5 273 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 SMIM10Q96HG1 83 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 C10orf90Q96M02 699 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 CTRCQ99895 268 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 TBCDQ9BTW9 1192 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 TRIM55Q9BYV6 548 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 AICDAQ9GZX7 198 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 NSRP1Q9H0G5 558 aaKnown RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
LINC00299-203ENST00000444688 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 PTGDR2Q9Y5Y4 395 aa12.53□□□□□ -0.4
LINC00299-203ENST00000444688 MDC1Q14676 2089 aaKnown RBP12.52□□□□□ -0.4
LINC00299-203ENST00000444688 DSCR3O14972 297 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 CPNE3O75131 537 aaKnown RBP12.52□□□□□ -0.41
LINC00299-203ENST00000444688 JUNP05412 331 aaKnown RBP12.52□□□□□ -0.41
LINC00299-203ENST00000444688 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
LINC00299-203ENST00000444688 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
LINC00299-203ENST00000444688 FOXC1Q12948 553 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 NR6A1Q15406 480 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 SMU1Q2TAY7 513 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 RHBDD2Q6NTF9 364 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 PAGE2Q7Z2X7 111 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 MAVSQ7Z434 540 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 UBE3DQ7Z6J8 389 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 METTL4Q8N3J2 472 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 OR2T11Q8NH01 316 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 PROKR1Q8TCW9 393 aa12.52□□□□□ -0.41
LINC00299-203ENST00000444688 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms