RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 HTR3AP46098 478 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 IL2P60568 153 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 TBPL1P62380 186 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 POU4F1Q01851 419 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 BMPR2Q13873 1038 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
USP6NL-203ENST00000443016 MROH9Q5TGP6 573 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 AGAP7PQ5VUJ5 663 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PRAMEF13Q5VWM6 474 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 KIRREL2Q6UWL6 708 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 FAM26EQ8N5C1 309 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 RBMXL3Q8N7X1 1067 aaKnown RBP8.32□□□□□ -1.08
USP6NL-203ENST00000443016 MVB12AQ96EY5 273 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 LINGO1Q96FE5 620 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ATP6V1G3Q96LB4 118 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 CCDC138Q96M89 665 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 AGAP4Q96P64 663 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 OR2A5Q96R48 311 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 CITED4Q96RK1 184 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 SH3GL2Q99962 352 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PCBD2Q9H0N5 130 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ATG10Q9H0Y0 220 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PARVBQ9HBI1 364 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 FFAR3O14843 346 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 HAT1O14929 419 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 GPR42O15529 346 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 SORBS2O94875 1100 aaKnown RBP8.32□□□□□ -1.08
USP6NL-203ENST00000443016 MED26O95402 600 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 STMN1P16949 149 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 SAT1P21673 171 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 GNLYP22749 145 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 TYK2P29597 1187 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 GRK3P35626 688 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 UQCRFS1P47985 274 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 CD97P48960 835 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 CDKN2DP55273 166 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 NDUFA9Q16795 377 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PRTGQ2VWP7 1150 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 RBM20Q5T481 1227 aaKnown RBP8.32□□□□□ -1.08
USP6NL-203ENST00000443016 GARNL3Q5VVW2 1013 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ZNF425Q6IV72 752 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 RAPH1Q70E73 1250 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ACMSDQ8TDX5 336 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 C10orf90Q96M02 699 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PHF12Q96QT6 1004 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 SMC6Q96SB8 1091 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 SLC29A3Q9BZD2 475 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 IQCGQ9H095 443 aaKnown RBP8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ARL15Q9NXU5 204 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ADAMTS6Q9UKP5 1117 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
USP6NL-203ENST00000443016 A0A0A6YYC8 382 aaPredicted RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 VSTM2BA6NLU5 285 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 I3L1I5 382 aaPredicted RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 SOCS6O14544 535 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 AGFG2O95081 481 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 STATHP02808 62 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 HRH2P25021 359 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 GABRB3P28472 473 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 CRABP2P29373 138 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 EMP3P54852 163 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 SOX8P57073 446 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 SP140Q13342 867 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 NAE1Q13564 534 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 PLEKHN1Q494U1 663 aaPredicted RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 PRR30Q53SZ7 412 aaPredicted RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 MFSD4BQ5TF39 518 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 HECTD2Q5U5R9 776 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 AGTRAPQ6RW13 159 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 MTERF4Q7Z6M4 381 aaKnown RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 C17orf64Q86WR6 236 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 SRRM1Q8IYB3 904 aaKnown RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 OR11G2Q8NGC1 345 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 C8orf44Q96CB5 159 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 THOC3Q96J01 351 aaKnown RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 SARGQ9BW04 601 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 POPDC3Q9HBV1 291 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 TMEM184CQ9NVA4 438 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 VWA7Q9Y334 891 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 HEATR5BQ9P2D3 2071 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 NSG1A0A0A6YYJ2 146 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 IDSB3KWA1 339 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 EIF1AYO14602 144 aaKnown RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 GUCA1CO95843 209 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 HEXBP07686 556 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 CCND1P24385 295 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 AVPR1BP47901 424 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 GLRBP48167 497 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 EMP2P54851 167 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 RAB10P61026 200 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 RPS15AP62244 130 aaKnown RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 RELAQ04206 551 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 NXNQ6DKJ4 435 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 FAAH2Q6GMR7 532 aa8.31□□□□□ -1.08
USP6NL-203ENST00000443016 CAPN13Q6MZZ7 669 aaPredicted RBP8.31□□□□□ -1.08
USP6NL-203ENST00000443016 IGFL3Q6UXB1 125 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms