RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TUBA3CQ13748 450 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 USP10Q14694 798 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 OR1C1Q15619 314 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 CATSPEREQ5SY80 951 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 STEAP4Q687X5 459 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 H3F3CQ6NXT2 135 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 TUBA3EQ6PEY2 450 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 RPTNQ6XPR3 784 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 THOC6Q86W42 341 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 IGDCC3Q8IVU1 814 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 AFAP1L2Q8N4X5 818 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 PLPP5Q8NEB5 264 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 OR4K1Q8NGD4 311 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 OR5T3Q8NGG3 340 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 TSLPQ969D9 159 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 NEIL2Q969S2 332 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 MARVELD3Q96A59 401 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 CLK4Q9HAZ1 481 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 PRM3Q9NNZ6 103 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 KLHL1Q9NR64 748 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 SH3BGRL2Q9UJC5 107 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 KCNE2Q9Y6J6 123 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 FAM95CA0A1B0GW59 222 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 OR2W5A6NFC9 320 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 GABRR3A8MPY1 467 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 FCHO1O14526 889 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 CHST10O43529 356 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 PRMT3O60678 531 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 B4GALT2O60909 372 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ESRRAP11474 423 aaPredicted RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 ZNF37AP17032 561 aaPredicted RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 HNF4AP41235 474 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 PAFAH1B1P43034 410 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 SCTRP47872 440 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 HNMTP50135 292 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ITGA8P53708 1063 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 STXBP1P61764 594 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 OLR1P78380 273 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ALDH6A1Q02252 535 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 FRG1Q14331 258 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 QSOX2Q6ZRP7 698 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ADAMTSL2Q86TH1 951 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ANKMY2Q8IV38 441 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 LGI4Q8N135 537 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 TTLQ8NG68 377 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ANP32BQ92688 251 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 MOCOSQ96EN8 888 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 PDLIM5Q96HC4 596 aaKnown RBP11.07□□□□□ -0.64
TTC28-203ENST00000442232 FAR2Q96K12 515 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 PTCHD1Q96NR3 888 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 OLFM1Q99784 485 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 TRIM51Q9BSJ1 452 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 TRIM31Q9BZY9 425 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 RHBGQ9H310 441 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 LANCL2Q9NS86 450 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 ANKRD10Q9NXR5 420 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 TXNDC16Q9P2K2 825 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 CTNNAL1Q9UBT7 734 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 TEX264Q9Y6I9 313 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 CELSR2Q9HCU4 2923 aa11.07□□□□□ -0.64
TTC28-203ENST00000442232 A0A088AWK7 358 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 EFCAB8A8MWE9 144 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 CCDC188H7C350 402 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 SLC19A2O60779 497 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 H2AFYO75367 372 aaKnown RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 SEC31AO94979 1220 aaKnown RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 ZNF10P21506 573 aaPredicted RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 MST1P26927 711 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 HPDP32754 393 aaPredicted RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 CA7P43166 264 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 RAB8AP61006 207 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 GNG11P61952 73 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 CDKL1Q00532 357 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 PDIA2Q13087 525 aaKnown RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 ART3Q13508 389 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 TOR1AIP1Q5JTV8 583 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 NXPE4Q6UWF7 544 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 SBSNQ6UWP8 590 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 TICAM1Q8IUC6 712 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 ZNF808Q8N4W9 903 aaPredicted RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 MDS2Q8NDY4 140 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 FBXO36Q8NEA4 188 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 UTP15Q8TED0 518 aaKnown RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 CCT6BQ92526 530 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 OR4K3Q96R72 315 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 NAPGQ99747 312 aaPredicted RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 CDCP1Q9H5V8 836 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 PRDM9Q9NQV7 894 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 SLC22A14Q9Y267 594 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 OARD1Q9Y530 152 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 KLF2Q9Y5W3 355 aaPredicted RBP11.06□□□□□ -0.64
TTC28-203ENST00000442232 SAR1BQ9Y6B6 198 aa11.06□□□□□ -0.64
TTC28-203ENST00000442232 SAGE2PA6NJ88 616 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms