RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CCDC153Q494R4 210 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 PCSK4Q6UW60 755 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 MED25Q71SY5 747 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 TMEM102Q8N9M5 508 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 L3MBTL4Q8NA19 623 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 OR2W6PQ8NHA6 318 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 ZCCHC10Q8TBK6 192 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 GAL3ST3Q96A11 431 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 MAGEB10Q96LZ2 347 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 NTMT1Q9BV86 223 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 IPPKQ9H8X2 491 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 PCTPQ9UKL6 214 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 NAALAD2Q9Y3Q0 740 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 PCDHGA11Q9Y5H2 935 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 SCN2AQ99250 2005 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 CACNA1GO43497 2377 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 LRIT2A6NDA9 550 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 LRRC14BA6NHZ5 514 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 H0YIV9 168 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 ATP5F1P24539 256 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 RRADP55042 308 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 NAA20P61599 178 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 HERVK_113P63132 956 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 SNRPNP63162 240 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 KLC1Q07866 573 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 COL9A2Q14055 689 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 VWA2Q5GFL6 755 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 FAM69BQ5VUD6 431 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 PRSS41Q7RTY9 318 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 VN1R5Q7Z5H4 357 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 OR51Q1Q8NH59 317 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 REPS1Q96D71 796 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 CCDC126Q96EE4 140 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 YIPF2Q9BWQ6 316 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 ERVK-6Q9BXR3 956 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 SOX17Q9H6I2 414 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 ACTR8Q9H981 624 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 MKS1Q9NXB0 559 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 PLAAQ9Y263 795 aa14.24□□□□□ -0.13
CSNK1E-210ENST00000442216 A0A088AWK7 358 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 SGK494L7N484 410 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 AGPSO00116 658 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 PEX12O00623 359 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 COPEO14579 308 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 DLX3O60479 287 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ERLIN1O75477 346 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 BMP10O95393 424 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 CLDN9O95484 217 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZNF888P0CJ79 500 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 KRT4P19013 534 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 IMPDH1P20839 514 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZNF10P21506 573 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 OTX2P32243 289 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 PIK3CBP42338 1070 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 CCNG1P51959 295 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 POLE2P56282 527 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 TGM3Q08188 693 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 GGTA1PQ4G0N0 100 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 DEFB134Q4QY38 66 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 TOR1AIP1Q5JTV8 583 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 C10orf62Q5T681 223 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 MRGPREQ86SM8 312 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 CROCCP2Q86T23 111 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 TRABD2AQ86V40 505 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZC3H7AQ8IWR0 971 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 OR2L5Q8NG80 312 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 OR7G3Q8NG95 312 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 RDH11Q8TC12 318 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZNF483Q8TF39 744 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZNF473Q8WTR7 871 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 CCT6BQ92526 530 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ATP6V1E2Q96A05 226 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 MS4A6EQ96DS6 147 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 FER1L6-AS2Q96M78 137 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 OR1F2PQ96R84 312 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 CRB3Q9BUF7 120 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 NPLQ9BXD5 320 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 REXO4Q9GZR2 422 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 AICDAQ9GZX7 198 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 KLHL31Q9H511 634 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 NOL11Q9H8H0 719 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 ZBTB26Q9HCK0 441 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 PSD3Q9NYI0 1048 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 C3orf18Q9UK00 162 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 PCSK5Q92824 1860 aa14.23□□□□□ -0.13
CSNK1E-210ENST00000442216 DOCK10Q96BY6 2186 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 CCDC151A5D8V7 595 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 IDSB3KWA1 339 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 OR7A17O14581 309 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 RDH16O75452 317 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 TBX6O95947 436 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 OTCP00480 354 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 HNRNPH1P31943 449 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 XCR1P46094 333 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 ARFIP1P53367 373 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 PRKAA2P54646 552 aa14.22□□□□□ -0.13
CSNK1E-210ENST00000442216 EMP2P54851 167 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms