RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 RAB10P61026 200 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 ATP6V0D1P61421 351 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 SLC7A5Q01650 507 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 CKAP4Q07065 602 aaKnown RBP17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 TLR1Q15399 786 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 NR6A1Q15406 480 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 DEFB134Q4QY38 66 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 CDKL4Q5MAI5 379 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 GRTP1Q5TC63 336 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 CCDC25Q86WR0 208 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 CTAGE3PQ8IX95 158 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 TRPV3Q8NET8 790 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 FBF1Q8TES7 1133 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 HAS2Q92819 552 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 PSMG3-AS1Q96PY0 264 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 LRRC1Q9BTT6 524 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 KLHL31Q9H511 634 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 MAP10Q9P2G4 905 aa17.83■□□□□ 0.44
HMGB3P22-201ENST00000442010 NBPF19A0A087WUL8 3843 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 NCF1BA6NI72 391 aaPredicted RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 NCF1CA8MVU1 366 aaPredicted RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 CHST10O43529 356 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PRAMEF4O60810 478 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 SEC24DO94855 1032 aaPredicted RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 SERPIND1P05546 499 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 SERPINA6P08185 405 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 C1GALT1C1LP0DN25 315 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 NCF1P14598 390 aaPredicted RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 GNAZP19086 355 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 STX2P32856 288 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 KCNC1P48547 511 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 AGTR2P50052 363 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 OLR1P78380 273 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 EIF2S3LQ2VIR3 472 aaKnown RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 FHL5Q5TD97 284 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 MFSD4BQ5TF39 518 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PRAMEF9Q5VWM5 478 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PLAG1Q6DJT9 500 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 NIPAL1Q6NVV3 410 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 RPUSD3Q6P087 351 aaKnown RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 ABHD13Q7L211 337 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 TCAIMQ8N3R3 496 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PPM1NQ8N819 430 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PDPRQ8NCN5 879 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 KIAA1191Q96A73 305 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 CNDP1Q96KN2 507 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 PLA2G3Q9NZ20 509 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 GPRC5BQ9NZH0 403 aa17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 C19orf25Q9UFG5 118 aaPredicted RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 DIDO1Q9BTC0 2240 aaKnown RBP17.82■□□□□ 0.44
HMGB3P22-201ENST00000442010 SEMA7AO75326 666 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 CDC123O75794 336 aaPredicted RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 WFS1O76024 890 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 TBX6O95947 436 aaPredicted RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 FHP07954 510 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 SLC35E2BP0CK96 405 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 TNFSF10P50591 281 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 AP2B1P63010 937 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 DLG1Q12959 904 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 CDC16Q13042 620 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 NAB1Q13506 487 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 EFTUD2Q15029 972 aaKnown RBP eCLIP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 RBBP5Q15291 538 aaKnown RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 SULT1C3Q6IMI6 304 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 H3F3CQ6NXT2 135 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 CMC1Q7Z7K0 106 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 GPSM1Q86YR5 675 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 TSLPQ969D9 159 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 ESAMQ96AP7 390 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 TBC1D20Q96BZ9 403 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 C16orf45Q96MC5 204 aaPredicted RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 RBCK1Q9BYM8 510 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 RNF32Q9H0A6 362 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 NT5DC2Q9H857 520 aa17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 CLK4Q9HAZ1 481 aaKnown RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 PTBP2Q9UKA9 531 aaKnown RBP17.81■□□□□ 0.44
HMGB3P22-201ENST00000442010 URADA6NGE7 173 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 MAGEB17A8MXT2 336 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 RAB8AP61006 207 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 SKP1P63208 163 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 ARG2P78540 354 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 ABRAXAS2Q15018 415 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 FBXO48Q5FWF7 155 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 C8orf74Q6P047 294 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 ISCA2Q86U28 154 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 GRHL3Q8TE85 626 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 WDR34Q96EX3 536 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 EHD1Q9H4M9 534 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 WWOXQ9NZC7 414 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 NAV2Q8IVL1 2488 aa17.8■□□□□ 0.44
HMGB3P22-201ENST00000442010 DYTNA2CJ06 578 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 HMX2A2RU54 273 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 BLACEA4D250 179 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 E2F3O00716 465 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 STK16O75716 305 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 WDPCPO95876 746 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 RNF224P0DH78 156 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 EPORP19235 508 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms