RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PRSS23O95084 383 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TNFAIP8O95379 198 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 HPRP00739 348 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 KLK1P06870 262 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ASGR2P07307 311 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 IL3P08700 152 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 DDCP20711 480 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TPP2P29144 1249 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 PCGF2P35227 344 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 SOX11P35716 441 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 AHRP35869 848 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ACTR1BP42025 376 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TAS2R50P59544 299 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 SRP54P61011 504 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ACTR1AP61163 376 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 CYP4F2P78329 520 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 C2orf80Q0P641 193 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 FADDQ13158 208 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 GAB1Q13480 694 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 VEZF1Q14119 521 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 HEPACAMQ14CZ8 416 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TEAD4Q15561 434 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ANKRD26P1Q6NSI1 321 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF852Q6ZMS4 543 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 SYT13Q7L8C5 426 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ABI3BPQ7Z7G0 1075 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 CHERPQ8IWX8 916 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 SVOPLQ8N434 492 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ANKRD53Q8N9V6 530 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 OR2L3Q8NG85 312 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 OR2A1Q8NGT9 310 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 FBXO30Q8TB52 745 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ANKMY1Q9P2S6 941 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF639Q9UID6 485 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 OAZ3Q9UMX2 235 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
CPSF4-206ENST00000441580 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 PLEKHM1Q9Y4G2 1056 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 PCDHGA2Q9Y5H1 932 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 V9GYQ6 96 aa12.6□□□□□ -0.39
CPSF4-206ENST00000441580 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 H7BY64 318 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SOCS2O14508 198 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 RASGRP1O95267 797 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 FKBP9O95302 570 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 KRT75O95678 551 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 B3GALT4O96024 378 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SERPINA1P01009 418 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 F3P13726 295 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF23P17027 643 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 BSGP35613 385 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 TSFMP43897 325 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 TGM3Q08188 693 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 RBBP4Q09028 425 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SF1Q15637 639 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SMAD2Q15796 467 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 NRF1Q16656 503 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF385BQ569K4 471 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 GCNT6Q5T4J0 391 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 UGT2A3Q6UWM9 527 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 AMIGO1Q86WK6 493 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 C11orf65Q8NCR3 313 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 LCN9Q8WX39 176 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 VPS50Q96JG6 964 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 BMFQ96LC9 184 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 RDH12Q96NR8 316 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF717Q9BY31 904 aaPredicted RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 GSDMCQ9BYG8 508 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 CHST8Q9H2A9 424 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 XKR8Q9H6D3 395 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SLC6A20Q9NP91 592 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 POT1Q9NUX5 634 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 DNAJB9Q9UBS3 223 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 EXO1Q9UQ84 846 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 BTBD3Q9Y2F9 522 aa12.59□□□□□ -0.39
CPSF4-206ENST00000441580 MRPS17Q9Y2R5 130 aaKnown RBP12.59□□□□□ -0.39
CPSF4-206ENST00000441580 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms