RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IQCCQ4KMZ1 466 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CTSL3PQ5NE16 218 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 FAAH2Q6GMR7 532 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 DPY19L3Q6ZPD9 716 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CREB3L2Q70SY1 520 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ZZZ3Q8IYH5 903 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CFAP52Q8N1V2 620 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 EFHBQ8N7U6 833 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 CLHC1Q8NHS4 586 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 KCNJ9Q92806 393 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ZNF689Q96CS4 500 aaPredicted RBP11.47□□□□□ -0.57
LTBR-203ENST00000441074 REPS1Q96D71 796 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 BBS2Q9BXC9 721 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ASPNQ9BXN1 380 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 TIGARQ9NQ88 270 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 GKN1Q9NS71 199 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 RAD18Q9NS91 495 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ABCB8Q9NUT2 735 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 ZNF226Q9NYT6 803 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 PCDHGB3Q9Y5G1 929 aa11.47□□□□□ -0.57
LTBR-203ENST00000441074 LINC00854A0A1B0GVQ3 168 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TLR5O60602 858 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
LTBR-203ENST00000441074 ULK1O75385 1050 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 GJB3O75712 270 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 ACVRL1P37023 503 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 RPS19P39019 145 aaKnown RBP11.46□□□□□ -0.57
LTBR-203ENST00000441074 CDKN2CP42773 168 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 RORCP51449 518 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 CLCN4P51793 760 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 PSPHP78330 225 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 RING1Q06587 406 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TP53BP2Q13625 1128 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TAB1Q15750 504 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 FAM214AQ32MH5 1076 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 SLC35F1Q5T1Q4 408 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 SLC8B1Q6J4K2 584 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 RGL4Q8IZJ4 473 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 YIPF7Q8N8F6 280 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 OR4K2Q8NGD2 314 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 CHTF18Q8WVB6 975 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 COQ8BQ96D53 544 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 OR5M11Q96RB7 305 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TMEM175Q9BSA9 504 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 TAPBPLQ9BX59 468 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 BARHL1Q9BZE3 327 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 FAM83DQ9H4H8 585 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
LTBR-203ENST00000441074 MARCH2Q9P0N8 246 aa11.46□□□□□ -0.57
LTBR-203ENST00000441074 A0A0B4J293 547 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 LEUTXA8MZ59 168 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 FFAR3O14843 346 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 GPR42O15529 346 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 EFEMP2O95967 443 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 FGBP02675 491 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 C1QBP02746 253 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 AZGP1P25311 298 aaKnown RBP11.46□□□□□ -0.58
LTBR-203ENST00000441074 PIK3CGP48736 1102 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 CDKN1CP49918 316 aaPredicted RBP11.46□□□□□ -0.58
LTBR-203ENST00000441074 RPS14P62263 151 aaKnown RBP11.46□□□□□ -0.58
LTBR-203ENST00000441074 SLC14A1Q13336 389 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 SSX1Q16384 188 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 TMEM240Q5SV17 173 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 LRRC66Q68CR7 880 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 ANKRD46Q86W74 232 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 RNF31Q96EP0 1072 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 TMEM169Q96HH4 297 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 SPATA17Q96L03 361 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 C7orf34Q96L11 122 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 CNPPD1Q9BV87 410 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 C11orf54Q9H0W9 315 aaPredicted RBP11.46□□□□□ -0.58
LTBR-203ENST00000441074 TMEM245Q9H330 911 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 ZNF556Q9HAH1 456 aa11.46□□□□□ -0.58
LTBR-203ENST00000441074 LTBP2Q14767 1821 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 OR1I1O60431 355 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 KCNK5O95279 499 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 CCNYL3P0C7X3 344 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 CPN2P22792 545 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 PCDH1Q08174 1060 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
LTBR-203ENST00000441074 MED22Q15528 200 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 GLYR1Q49A26 553 aaPredicted RBP11.45□□□□□ -0.58
LTBR-203ENST00000441074 C5orf22Q49AR2 442 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 GDPGP1Q6ZNW5 385 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 GALNT10Q86SR1 603 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 FAM124AQ86V42 546 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 LAX1Q8IWV1 398 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 TRIM48Q8IWZ4 208 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 CPA6Q8N4T0 437 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 OR4M1Q8NGD0 313 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 WBP2Q969T9 261 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 PSKH2Q96QS6 385 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 MAGEH1Q9H213 219 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 NARFLQ9H6Q4 476 aa11.45□□□□□ -0.58
LTBR-203ENST00000441074 RC3H2Q9HBD1 1191 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms