RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RCN2Q14257 317 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TBCCQ15814 346 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 C18orf21Q32NC0 220 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 DEFB134Q4QY38 66 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TOR1AIP1Q5JTV8 583 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 FAAH2Q6GMR7 532 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ZC3H7AQ8IWR0 971 aaKnown RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 AFAP1L2Q8N4X5 818 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 EFCAB3Q8N7B9 438 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 PLPP5Q8NEB5 264 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 SRFBP1Q8NEF9 429 aaKnown RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 UHMK1Q8TAS1 419 aaKnown RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 UTP15Q8TED0 518 aaKnown RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TBC1D20Q96BZ9 403 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 MTBPQ96DY7 904 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 PEX11GQ96HA9 241 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 THOC3Q96J01 351 aaKnown RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 SCYL1Q96KG9 808 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 LMF1Q96S06 567 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TUBB6Q9BUF5 446 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 SLC6A16Q9GZN6 736 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 EPS8L2Q9H6S3 715 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ZNF160Q9HCG1 818 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 HCN3Q9P1Z3 774 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 COPG2Q9UBF2 871 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ADGRE2Q9UHX3 823 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 CHD6Q8TD26 2715 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 TNRC6AQ8NDV7 1962 aaKnown RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 LOC102723996A0A087X1L8 192 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 IQANK1A0A1B0GTG1 560 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 HMX2A2RU54 273 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 RIPK2O43353 540 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 CHST10O43529 356 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 WISP1O95388 367 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PDGFAP04085 211 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 SMIM10L1P0DMW3 83 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 SERPINB1P30740 379 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 CASP2P42575 452 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 GLRBP48167 497 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 KCNC1P48547 511 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PIK3CGP48736 1102 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ALDH18A1P54886 795 aaKnown RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 RAB8AP61006 207 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PHEXP78562 749 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 IRF9Q00978 393 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 EEF1A2Q05639 463 aaKnown RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 DOC2AQ14183 400 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PFKFB4Q16877 469 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 FBXO48Q5FWF7 155 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 TEX35Q5T0J7 233 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 JMJD6Q6NYC1 403 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 METTL2BQ6P1Q9 378 aaKnown RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 MED27Q6P2C8 311 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 TRIM40Q6P9F5 258 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 IGFL3Q6UXB1 125 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ISLR2Q6UXK2 745 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PRSS41Q7RTY9 318 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 CPEB2Q7Z5Q1 589 aaKnown RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ATCAYQ86WG3 371 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 CENPLQ8N0S6 344 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ANKRD53Q8N9V6 530 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 CREB3L4Q8TEY5 395 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 GAL3ST3Q96A11 431 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 PNPLA2Q96AD5 504 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 C8orf44Q96CB5 159 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 MOCOSQ96EN8 888 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 WDR34Q96EX3 536 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 SMIM10Q96HG1 83 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 NPLQ9BXD5 320 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 ROGDIQ9GZN7 287 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 SPNS1Q9H2V7 528 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 COPS7BQ9H9Q2 264 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-216ENST00000439475 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
MCF2L-216ENST00000439475 IGHV1-45A0A0A0MS14 117 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 A0A1W2PQ72 361 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 LRIT2A6NDA9 550 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ZNF860A6NHJ4 632 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 TRIM49D1C9J1S8 452 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CLDN4O14493 209 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 B3GALT2O43825 422 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 SMIM24O75264 130 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 ALDOAP04075 364 aaKnown RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 SERPINA7P05543 415 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 FHP07954 510 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 MYBL2P10244 700 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 COX6A1P12074 109 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 RNH1P13489 461 aaKnown RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CSRP3P50461 194 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 BTN3A2P78410 334 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 NAA30Q147X3 362 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 SETDB1Q15047 1291 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 PCBP2Q15366 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
MCF2L-216ENST00000439475 NSDHLQ15738 373 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 CRB2Q5IJ48 1285 aa9.88□□□□□ -0.83
MCF2L-216ENST00000439475 LIPJQ5W064 366 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms