RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TP53BP2Q13625 1128 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 SGO1Q5FBB7 561 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 RAP1GAP2Q684P5 730 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 DOK6Q6PKX4 331 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 RTL10Q7L3V2 364 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 ADAMTS19Q8TE59 1207 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 MCCC1Q96RQ3 725 aaPredicted RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 DHRS9Q9BPW9 319 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 GON7Q9BXV9 100 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 POLR1EQ9GZS1 481 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 LRTM1Q9HBL6 345 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 OLA1Q9NTK5 396 aaKnown RBP8.26□□□□□ -1.09
HPS4-206ENST00000439453 MAN2B2Q9Y2E5 1009 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 KLHL20Q9Y2M5 609 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 PCM1Q15154 2024 aa8.26□□□□□ -1.09
HPS4-206ENST00000439453 C9P02748 559 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 HMGA1P17096 107 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 CD72P21854 359 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 PKLRP30613 574 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 S100A3P33764 101 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 GGT2P36268 569 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CDKN2CP42773 168 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 OR3A3P47888 321 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TWF1Q12792 350 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 BAK1Q16611 211 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 FAM214AQ32MH5 1076 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 CCDC28AQ8IWP9 274 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CRELD1Q96HD1 420 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C1orf74Q96LT6 269 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 BEX2Q9BXY8 128 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ZYG11BQ9C0D3 744 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ROGDIQ9GZN7 287 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C3orf14Q9HBI5 128 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 AASDHPPTQ9NRN7 309 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 RAD18Q9NS91 495 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TMEM248Q9NWD8 314 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 MOSPD1Q9UJG1 213 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 RPS6KA6Q9UK32 745 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C2CD4DB7Z1M9 353 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 PLK4O00444 970 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CPNE3O75131 537 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 B3GALT4O96024 378 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 HOXB9P17482 250 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 PTPN6P29350 595 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ITGA1P56199 1179 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 SLC14A1Q13336 389 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TTLL9Q3SXZ7 439 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 USP39Q53GS9 565 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 ZMAT1Q5H9K5 638 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TOR1AIP1Q5JTV8 583 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C10orf62Q5T681 223 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 PIANPQ8IYJ0 282 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CACTIN-AS1Q8N1I8 211 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 FAM109AQ8N4B1 249 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CARNMT1Q8N4J0 409 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TCEAL4Q96EI5 215 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 HSH2DQ96JZ2 352 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 MYADMQ96S97 322 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 COQ7Q99807 217 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 MKRN2Q9H000 416 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 ASAH2Q9NR71 780 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ASIC5Q9NY37 505 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C12orf71A8MTZ7 269 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 RGS5O15539 181 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 BCKDHAP12694 445 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 HSPA7P48741 367 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CD83Q01151 205 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 IL10RBQ08334 325 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ST3GAL4Q11206 333 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TAB1Q15750 504 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TSTQ16762 297 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 PSAPL1Q6NUJ1 521 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 GRASPQ7Z6J2 395 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 SCD5Q86SK9 330 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 ZNF683Q8IZ20 524 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 CHCHD4Q8N4Q1 142 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 TP53I13Q8NBR0 393 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 OR5H6Q8NGV6 325 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 GPR151Q8TDV0 419 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 C2orf15Q8WU43 125 aaKnown RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 ASB15Q8WXK1 588 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 RMDN1Q96DB5 314 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 PHF7Q9BWX1 381 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 UBA2Q9UBT2 640 aaPredicted RBP8.25□□□□□ -1.09
HPS4-206ENST00000439453 DNMT3LQ9UJW3 386 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 V9GYH0 126 aa8.25□□□□□ -1.09
HPS4-206ENST00000439453 A0A1W2PQ09 198 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 E5RI56 91 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF780AO75290 641 aaPredicted RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 UBL4AP11441 157 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 PRKACBP22694 351 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF367Q7RTV3 350 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF605Q86T29 641 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms