RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SNX20Q7Z614 316 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ADCK2Q7Z695 626 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 VRK3Q8IV63 474 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 RIMKLAQ8IXN7 391 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR8H3Q8N146 312 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF548Q8NEK5 533 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR4K1Q8NGD4 311 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PIK3R3Q92569 461 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 GTF2H4Q92759 462 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PYURFQ96I23 114 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MAP6Q96JE9 813 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PKP4Q99569 1192 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TCF25Q9BQ70 676 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 B4GALT6Q9UBX8 382 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ITGB1BP2Q9UKP3 347 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 RAB23Q9ULC3 237 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCL26Q9Y258 94 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 YARS2Q9Y2Z4 477 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MAP4K5Q9Y4K4 846 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CFAP20Q9Y6A4 193 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ERN1O75460 977 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 FABP3P05413 133 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR56A5P0C7T3 313 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TNNI3P19429 210 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PRKACBP22694 351 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CLCN7P51798 805 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 RPS14P62263 151 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ACSM2AQ08AH3 577 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 NOGQ13253 232 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 BAK1Q16611 211 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 AGAP6Q5VW22 663 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ACSM2BQ68CK6 577 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCSAPQ6IQ19 270 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ADNP2Q6IQ32 1131 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SBSNQ6UWP8 590 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMIGD1Q6UXZ0 262 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMPRSS11AQ6ZMR5 421 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 EIF3MQ7L2H7 374 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 GALNT13Q8IUC8 556 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 GPR150Q8NGU9 434 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SH3KBP1Q96B97 665 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 APIPQ96GX9 242 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 AGAP4Q96P64 663 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 BRD9Q9H8M2 597 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 NKIRAS2Q9NYR9 191 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 LHX3Q9UBR4 397 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ITM2BQ9Y287 266 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 WNT6Q9Y6F9 365 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MIA3Q5JRA6 1907 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 A0A0G2JN53 185 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 H3BNC9 293 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 I3L521 148 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MANBAO00462 879 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 FPGTO14772 594 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TRBC1P01850 177 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 RPLP0P05388 317 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 NNMTP40261 264 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ETV3P41162 512 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ALDH9A1P49189 494 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SNRPD1P62314 119 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 GBX1Q14549 363 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MAD2L1BPQ15013 274 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 FLYWCH1Q4VC44 716 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 USP45Q70EL2 814 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 OLIG3Q7RTU3 272 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF438Q7Z4V0 828 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZSWIM9Q86XI8 627 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMEM132CQ8N3T6 1108 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC5A8Q8N695 610 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR7G1Q8NGA0 311 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 JPH3Q8WXH2 748 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC38A4Q969I6 547 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 PLD4Q96BZ4 506 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF300Q96RE9 604 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF382Q96SR6 550 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF222Q9UK12 451 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 INSL5Q9Y5Q6 135 aa9.58□□□□□ -0.88
CDC42SE1-202ENST00000439374 MGAT4DA6NG13 374 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 STX16O14662 325 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TAPBPO15533 448 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TP53P04637 393 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 EIF2S1P05198 315 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 C8AP07357 584 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 DNAJB1P25685 340 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TNFSF8P32971 234 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PSMD8P48556 350 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 RPS26P62854 115 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC35A2P78381 396 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 GALNT1Q10472 559 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NPRL3Q12980 569 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PLEKHG6Q3KR16 790 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CPZQ66K79 652 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 C8orf82Q6P1X6 216 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CYP2U1Q7Z449 544 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF557Q8N988 423 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 C1GALT1C1Q96EU7 318 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms