RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MRM3Q9HC36 420 aaKnown RBP11.68□□□□□ -0.54
NEK1-201ENST00000439128 TVP23BQ9NYZ1 205 aa11.68□□□□□ -0.54
NEK1-201ENST00000439128 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 ZNF3P17036 446 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PTGIRP43119 386 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 TGFBIQ15582 683 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 ZDHHC14Q8IZN3 488 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 MREGQ8N565 214 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 NAT8LQ8N9F0 302 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 C3orf58Q8NDZ4 430 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 UBASH3BQ8TF42 649 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 TSGA13Q96PP4 275 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 DSN1Q9H410 356 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 ASB6Q9NWX5 421 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 BTBD3Q9Y2F9 522 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 SPEF2Q9C093 1822 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PLCH1Q4KWH8 1693 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 A0A087WXM4 84 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 TRIM64A6NGJ6 449 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 EDF1O60869 148 aaKnown RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 OPN1SWP03999 348 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 CD2P06729 351 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 EBLN1P0CF75 366 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 AK4P27144 223 aaPredicted RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 EMP2P54851 167 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 SLC7A9P82251 487 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 SHC2P98077 582 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PYDC2Q56P42 97 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PARM1Q6UWI2 310 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 GALNT12Q8IXK2 581 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 C7orf57Q8NEG2 295 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 RBP7Q96R05 134 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 BHLHE41Q9C0J9 482 aaPredicted RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 HAPLN2Q9GZV7 340 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 GRHPRQ9UBQ7 328 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 POFUT2Q9Y2G5 429 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 TFECO14948 347 aaPredicted RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 MAFKO60675 156 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 ZBTB11O95625 1053 aaPredicted RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 ATP6V1G2O95670 118 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 RAB25P57735 213 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PMS2P3Q13401 168 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 LIN54Q6MZP7 749 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 SPATC1Q76KD6 591 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PPP1R3BQ86XI6 285 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 ZCCHC7Q8N3Z6 543 aaKnown RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 OR6C4Q8NGE1 309 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 NFKBIDQ8NI38 313 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 EPHA6Q9UF33 1036 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 TAF4O00268 1085 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PEX14O75381 377 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 PROZP22891 400 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 CHN2P52757 468 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 FBXO42Q6P3S6 717 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 SLC5A8Q8N695 610 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
NEK1-201ENST00000439128 MRGPRX2Q96LB1 330 aa11.67□□□□□ -0.54
NEK1-201ENST00000439128 CLIC1O00299 241 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 AQP9O43315 295 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 BPIP17213 487 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 PTNP21246 168 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 RORAP35398 523 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ADGRE1Q14246 886 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 GRIN2CQ14957 1233 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ZC3HC1Q86WB0 502 aaKnown RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ADAD1Q96M93 576 aaKnown RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 TWSG1Q9GZX9 223 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 CLEC4MQ9H2X3 399 aaPredicted RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 COMMD9Q9P000 198 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 DHRS7Q9Y394 339 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 TMED5Q9Y3A6 229 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 OR52A4PA6NMU1 304 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 SLC16A5O15375 505 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ABCB7O75027 752 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 CAPGP40121 348 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ZNF84P51523 738 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 PDCD4Q53EL6 469 aaKnown RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 ADGRD2Q7Z7M1 963 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 OR4N5Q8IXE1 308 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 C11orf98E9PRG8 122 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 PIK3CBP42338 1070 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 C3orf38Q5JPI3 329 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 ORAI3Q9BRQ5 295 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 RPF2Q9H7B2 306 aaKnown RBP11.66□□□□□ -0.54
NEK1-201ENST00000439128 MARCH7Q9H992 704 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
NEK1-201ENST00000439128 RGPD5Q99666 1765 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms