RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 GSTO2Q9H4Y5 243 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 ANKHQ9HCJ1 492 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF304Q9HCX3 659 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 CTSFQ9UBX1 484 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 CDC14AQ9UNH5 594 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 PCDHGA6Q9Y5G7 932 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 SLC22A7Q9Y694 548 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 KMT2BQ9UMN6 2715 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-203ENST00000439080 MGAQ8IWI9 3026 aa16.06■□□□□ 0.16
TARDBP-203ENST00000439080 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 C4orf51C9J302 202 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 H0YIV9 168 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 AGPSO00116 658 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.162e-14■■□□□ 12.4
TARDBP-203ENST00000439080 EFSO43281 561 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 NSA2O95478 260 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 TBX6O95947 436 aaPredicted RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 ONECUT2O95948 504 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 UQCRHP07919 91 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 PIM1P11309 404 aaPredicted RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 PTPN4P29074 926 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 SERPINB1P30740 379 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 HNRNPH1P31943 449 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 AVPR1BP47901 424 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 STXBP1P61764 594 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 DDX39BQ13838 428 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 HERC3Q15034 1050 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 FAM69BQ5VUD6 431 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 MLIPQ5VWP3 458 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 MRPL14Q6P1L8 145 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 FRMD7Q6ZUT3 714 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 AFAP1L2Q8N4X5 818 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 AMER3Q8N944 861 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 UTP15Q8TED0 518 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF473Q8WTR7 871 aaKnown RBP16.05■□□□□ 0.16
TARDBP-203ENST00000439080 REPS1Q96D71 796 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 SLC45A3Q96JT2 553 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF382Q96SR6 550 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 MECRQ9BV79 373 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 KLHL31Q9H511 634 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 STK38LQ9Y2H1 464 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 PADI2Q9Y2J8 665 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
TARDBP-203ENST00000439080 LRIT2A6NDA9 550 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 URADA6NGE7 173 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF860A6NHJ4 632 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 H0YIG0 161 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 SGK494L7N484 410 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 CNOT3O75175 753 aaKnown RBP16.04■□□□□ 0.16
TARDBP-203ENST00000439080 KLHL18O94889 574 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 MLYCDO95822 493 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ALOX12P18054 663 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ETV4P43268 484 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 NAGLUP54802 743 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 RAB8AP61006 207 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 CXADRP78310 365 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ZRSR2Q15696 482 aaKnown RBP16.04■□□□□ 0.16
TARDBP-203ENST00000439080 DEFB134Q4QY38 66 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 CFAP157Q5JU67 520 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 FAM219BQ5XKK7 198 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 GPRIN3Q6ZVF9 776 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 MILR1Q7Z6M3 343 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 SYVN1Q86TM6 617 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 RNF175Q8N4F7 328 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 HUS1BQ8NHY5 278 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 GAL3ST3Q96A11 431 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 CRELD1Q96HD1 420 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 MAGEB10Q96LZ2 347 aaPredicted RBP16.04■□□□□ 0.16
TARDBP-203ENST00000439080 MS4A8Q9BY19 250 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 DMRT3Q9NQL9 472 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 TRPS1Q9UHF7 1281 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF225Q9UK10 706 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 FARSAQ9Y285 508 aaKnown RBP16.04■□□□□ 0.16
TARDBP-203ENST00000439080 NAALAD2Q9Y3Q0 740 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 TSC22D4Q9Y3Q8 395 aa16.04■□□□□ 0.16
TARDBP-203ENST00000439080 ZNF891A8MT65 544 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 FFAR3O14843 346 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 TM9SF1O15321 606 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 GPR42O15529 346 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 ERI3O43414 337 aaKnown RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 GALR3O60755 368 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 RDH16O75452 317 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 OR4F21O95013 312 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 B3GALT4O96024 378 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 ALDH3A1P30838 453 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 HPDP32754 393 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 FOXL2P58012 376 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 MAGOHP61326 146 aaKnown RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 NAA20P61599 178 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 SKP1P63208 163 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 PHEXP78562 749 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 MAT1AQ00266 395 aaKnown RBP16.03■□□□□ 0.16
TARDBP-203ENST00000439080 IL10RAQ13651 578 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 SYT16Q17RD7 645 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 ADPRMQ3LIE5 342 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 ZSCAN1Q8NBB4 408 aa16.03■□□□□ 0.16
TARDBP-203ENST00000439080 WDR20Q8TBZ3 569 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms