RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TAS2R13Q9NYV9 303 aa7.33□□□□□ -1.24
VPS50-204ENST00000438395 GALPQ9UBC7 116 aa7.33□□□□□ -1.24
VPS50-204ENST00000438395 DHRS7Q9Y394 339 aa7.33□□□□□ -1.24
VPS50-204ENST00000438395 KLF2Q9Y5W3 355 aaPredicted RBP7.33□□□□□ -1.24
VPS50-204ENST00000438395 ANKRD17O75179 2603 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 ANKRD12Q6UB98 2062 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 KCNE1BA0A087WTH5 132 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 IGHV3-20A0A0C4DH32 117 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ZNF860A6NHJ4 632 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 GFYI3L273 518 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 SGK494L7N484 410 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 PSMD12O00232 456 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 PGRMC1O00264 195 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 NDUFS4O43181 175 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 RDH16O75452 317 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 CDC123O75794 336 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 F7P08709 466 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 CDH1P12830 882 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 NID1P14543 1247 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ABOP16442 354 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 PGAM1P18669 254 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 IL10P22301 178 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 HTR1EP28566 365 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 COILP38432 576 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 BCL6P41182 706 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 CA7P43166 264 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 IDH3AP50213 366 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 CCR8P51685 355 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 TDGF1P3P51864 188 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 OR4D2P58180 307 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 MPP1Q00013 466 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ALDH6A1Q02252 535 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 RGS1Q08116 209 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 NAE1Q13564 534 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 DOC2BQ14184 412 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 PPP1R7Q15435 360 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 OR1C1Q15619 314 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 MEP1AQ16819 746 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ZXDCQ2QGD7 858 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 SFT2D3Q587I9 215 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 HSP90AA5PQ58FG0 334 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ANKRD22Q5VYY1 191 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ZNF324BQ6AW86 544 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 FCRLBQ6BAA4 426 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 SP5Q6BEB4 398 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 CAPN13Q6MZZ7 669 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 PAPD4Q6PIY7 484 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 AGTRAPQ6RW13 159 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 BNC2Q6ZN30 1099 aaPredicted RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 MRGPRGQ86SM5 289 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 CAND1Q86VP6 1230 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 EID3Q8N140 333 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 BEST3Q8N1M1 668 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 MCUQ8NE86 351 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ATL1Q8WXF7 558 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 LINGO1Q96FE5 620 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 IMMP1LQ96LU5 166 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 SERPINB12Q96P63 405 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 OR1F2PQ96R84 312 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 CYTH2Q99418 400 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 RBCK1Q9BYM8 510 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 UNKQ9C0B0 810 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 PARVBQ9HBI1 364 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 PPANQ9NQ55 473 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 IARS2Q9NSE4 1012 aaKnown RBP7.32□□□□□ -1.24
VPS50-204ENST00000438395 ARL15Q9NXU5 204 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 ASIC3Q9UHC3 531 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 NAALAD2Q9Y3Q0 740 aa7.32□□□□□ -1.24
VPS50-204ENST00000438395 MDC1Q14676 2089 aaKnown RBP7.31□□□□□ -1.24
VPS50-204ENST00000438395 APCP25054 2843 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ZCWPW2A0A1B0GU75 182 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 URADA6NGE7 173 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 GABRR3A8MPY1 467 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 NDC80O14777 642 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 OR1F1O43749 312 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 TTC4O95801 387 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ZNF24P17028 368 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 PTGER4P35408 488 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 AP1S2P56377 157 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 IL2P60568 153 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 CSNK1G2P78368 415 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 PMP22Q01453 160 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 CRYMQ14894 314 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ZNF549Q6P9A3 640 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 CCDC137Q6PK04 289 aaKnown RBP7.31□□□□□ -1.24
VPS50-204ENST00000438395 XKRXQ6PP77 449 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ABHD13Q7L211 337 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 PRSS41Q7RTY9 318 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 VN1R4Q7Z5H5 301 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ANKRD37Q7Z713 158 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 GAS2L3Q86XJ1 694 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 PPIL6Q8IXY8 311 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 GPATCH11Q8N954 259 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 M1APQ8TC57 530 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ITLN2Q8WWU7 325 aaPredicted RBP7.31□□□□□ -1.24
VPS50-204ENST00000438395 TMEM125Q96AQ2 219 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 TBC1D20Q96BZ9 403 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms