RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PRAMEF14Q5SWL7 426 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF691Q5VV52 312 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PRAMEF13Q5VWM6 474 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 MACC1Q6ZN28 852 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CDH24Q86UP0 819 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PGBD3Q8N328 593 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SRFBP1Q8NEF9 429 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 BPIFB1Q8TDL5 484 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 C11orf24Q96F05 449 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 FCRL4Q96PJ5 515 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 GFM1Q96RP9 751 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PHOX2BQ99453 314 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 C1QTNF7Q9BXJ2 289 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TRPV5Q9NQA5 729 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 C2orf78A6NCI8 922 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 FXYD1O00168 92 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TLX2O43763 284 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SSNA1O43805 119 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CDRT1O95170 752 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 GJA1P17302 382 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SDC1P18827 310 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 GADD45AP24522 165 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 HRH2P25021 359 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 POLR2IP36954 125 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 STAT5AP42229 794 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 BLVRAP53004 296 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PRR5P85299 388 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CAP1Q01518 475 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 NOGQ13253 232 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 MAD2L1BPQ15013 274 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TBC1D25Q3MII6 688 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CYP27C1Q4G0S4 372 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CDKL4Q5MAI5 379 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 FAM46CQ5VWP2 391 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CXorf57Q6NSI4 855 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TMIGD1Q6UXZ0 262 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SPNS2Q8IVW8 549 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ADGRG2Q8IZP9 1017 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TCEANCQ8N8B7 351 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 AUTS2Q8WXX7 1259 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TRIB2Q92519 343 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM80Q96HE8 168 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 MS4A4AQ96JQ5 239 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TRNT1Q96Q11 434 aaKnown RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PTPN18Q99952 460 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SLC12A9Q9BXP2 914 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SLC2A11Q9BYW1 496 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ACPTQ9BZG2 426 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SLITRK2Q9H156 845 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CLMPQ9H6B4 373 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TAS2R9Q9NYW1 312 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 GTF2A1LQ9UNN4 478 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CLCA1A8K7I4 914 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM189-UBE2V1I3L0A0 370 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 I6L893 689 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 KIAA0513O60268 411 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ADH1CP00326 375 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 YES1P07947 543 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ITGAMP11215 1152 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 DGKGP49619 791 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 STK19P49842 368 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SUOXP51687 545 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 LMAN2Q12907 356 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ANGPT1Q15389 498 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 UGT3A2Q3SY77 523 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 C11orf88Q6PI97 169 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 DPY19L3Q6ZPD9 716 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SERPINA11Q86U17 422 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TSPAN33Q86UF1 283 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 NUDT13Q86X67 352 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 FAM20CQ8IXL6 584 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SLC5A8Q8N695 610 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 UXS1Q8NBZ7 420 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 MUL1Q969V5 352 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CCDC115Q96NT0 180 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CAMK1GQ96NX5 476 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PIP5K1AQ99755 562 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 PCBD2Q9H0N5 130 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 TIGARQ9NQ88 270 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 CALML5Q9NZT1 146 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 DEC1Q9P2X7 70 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 P2RX2Q9UBL9 471 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 DKK3Q9UBP4 350 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 MGAT4BQ9UQ53 548 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ERVW-1Q9UQF0 538 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 INSL5Q9Y5Q6 135 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 ATAD5Q96QE3 1844 aa6.45□□□□□ -1.38
CSDE1-205ENST00000438362 SEC14L2O76054 403 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FGF19O95750 216 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PSKH1P11801 424 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 JUNBP17275 347 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 HTR1BP28222 390 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 KHKP50053 298 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 RGS1Q08116 209 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FCHO2Q0JRZ9 810 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 VEZF1Q14119 521 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 LARS2Q15031 903 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms